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The map label for this gene is ycbC [H]

Identifier: 13470862

GI number: 13470862

Start: 528462

End: 529259

Strand: Reverse

Name: ycbC [H]

Synonym: mll0674

Alternate gene names: 13470862

Gene position: 529259-528462 (Counterclockwise)

Preceding gene: 13470863

Following gene: 13470860

Centisome position: 7.52

GC content: 62.41

Gene sequence:

>798_bases
ATGTTCTTCCTTCTTTCCAAGGTCTTCTGGTTCTTCGTCCAGCCGCTCAACCTGACGATCTTCCTGCTTCTGGCGGGGCT
GATCGCCGGGATGATCGGCCGGCGGCGGCTGGCCGTCACCGGCAGTGTGCTAGCCTTCTTGATTTTGGCGCTCTCGACCT
GGACGTCGCTTGGCGCGATGATGCTCAACCCGCTCGAGGAGCGATTTCCACGGCCGCCGCTGCCGCAAAAGGTCGACGGC
ATCGTCGTGCTGGGCGGCGGCTTCGAGGGCGCCATCAACCTCGCACGTGGCGGCTATGAATTGAGCAGCAGCGGCGACCG
CATGGTCGAGACCGCAATCCTCGCCCGGCGCTTCCCACTGGCCAAAGTGGTTGTATCAGGCGGACACGGCGCGTTTTTCA
TCGACGCCGAGGGGGACGCCGACTCAGCGTCCCGCATGCTCGTTCCGCTCGGTGTATCGGCCGATCGTCTTGTCCTGGAA
GACAAGTCCCGCAACACGTACGAAAATGCGATCTTCAGCCGCAAACTTGTCGAGCCGAAGCCGGGCGAGACCTGGCTGCT
GGTGACCTCCGCCTTCCACATGCCACGGGCCAAGGCGCTGTTCGACAAGGCTGGTTTTCCAACCGTCCCATGGCCGGTCG
ACTATCACACCTCCGGCAAGGAAGGTGTCGGCTTGTTTCGCGACAATGCGATCGATTCCGTGCAGAACACCACCATAGCG
CTCCGCGAATGGATCGGGCTTTTTGCCTATTGGCTTTCCGGCCGCATCGATCAGCCTTTTCCGGGGCCGGGCGGCTGA

Upstream 100 bases:

>100_bases
GAGACGCTGTTCCAGACCGCCGCCGTCATCGAGCAGGCGGCCGGCACATTTCAGCCTGAGAAGTGGTGGTAAGGATATCG
ATCATCTGAAGGGGTGAGCG

Downstream 100 bases:

>100_bases
CCGATGACGGCGCGTCGCGCCGCCGAGAAGAACTGGCGCCGCACCAGCACGGCCAGCAGCAGAAGCGTCGACAGAACGAA
CACCACCGGATCGACGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MFFLLSKVFWFFVQPLNLTIFLLLAGLIAGMIGRRRLAVTGSVLAFLILALSTWTSLGAMMLNPLEERFPRPPLPQKVDG
IVVLGGGFEGAINLARGGYELSSSGDRMVETAILARRFPLAKVVVSGGHGAFFIDAEGDADSASRMLVPLGVSADRLVLE
DKSRNTYENAIFSRKLVEPKPGETWLLVTSAFHMPRAKALFDKAGFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIA
LREWIGLFAYWLSGRIDQPFPGPGG

Sequences:

>Translated_265_residues
MFFLLSKVFWFFVQPLNLTIFLLLAGLIAGMIGRRRLAVTGSVLAFLILALSTWTSLGAMMLNPLEERFPRPPLPQKVDG
IVVLGGGFEGAINLARGGYELSSSGDRMVETAILARRFPLAKVVVSGGHGAFFIDAEGDADSASRMLVPLGVSADRLVLE
DKSRNTYENAIFSRKLVEPKPGETWLLVTSAFHMPRAKALFDKAGFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIA
LREWIGLFAYWLSGRIDQPFPGPGG
>Mature_265_residues
MFFLLSKVFWFFVQPLNLTIFLLLAGLIAGMIGRRRLAVTGSVLAFLILALSTWTSLGAMMLNPLEERFPRPPLPQKVDG
IVVLGGGFEGAINLARGGYELSSSGDRMVETAILARRFPLAKVVVSGGHGAFFIDAEGDADSASRMLVPLGVSADRLVLE
DKSRNTYENAIFSRKLVEPKPGETWLLVTSAFHMPRAKALFDKAGFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIA
LREWIGLFAYWLSGRIDQPFPGPGG

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=154, Percent_Identity=31.8181818181818, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28914; Mature: 28914

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLLSKVFWFFVQPLNLTIFLLLAGLIAGMIGRRRLAVTGSVLAFLILALSTWTSLGAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MLNPLEERFPRPPLPQKVDGIVVLGGGFEGAINLARGGYELSSSGDRMVETAILARRFPL
HHCHHHHHCCCCCCCCCCCEEEEECCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHCCC
AKVVVSGGHGAFFIDAEGDADSASRMLVPLGVSADRLVLEDKSRNTYENAIFSRKLVEPK
EEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCC
PGETWLLVTSAFHMPRAKALFDKAGFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIA
CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHH
LREWIGLFAYWLSGRIDQPFPGPGG
HHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFFLLSKVFWFFVQPLNLTIFLLLAGLIAGMIGRRRLAVTGSVLAFLILALSTWTSLGAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MLNPLEERFPRPPLPQKVDGIVVLGGGFEGAINLARGGYELSSSGDRMVETAILARRFPL
HHCHHHHHCCCCCCCCCCCEEEEECCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHCCC
AKVVVSGGHGAFFIDAEGDADSASRMLVPLGVSADRLVLEDKSRNTYENAIFSRKLVEPK
EEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCC
PGETWLLVTSAFHMPRAKALFDKAGFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIA
CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHH
LREWIGLFAYWLSGRIDQPFPGPGG
HHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]