| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yufQ [H]
Identifier: 13470721
GI number: 13470721
Start: 369657
End: 370577
Strand: Reverse
Name: yufQ [H]
Synonym: mll0502
Alternate gene names: 13470721
Gene position: 370577-369657 (Counterclockwise)
Preceding gene: 13470722
Following gene: 13470720
Centisome position: 5.27
GC content: 64.82
Gene sequence:
>921_bases ATGGACATCACCGTCAACATCCTCTTGACCATCGCAACGGCCGCAACGCCGCTTTTGATCGCGGCGATCGGCGAACTGGT GGTCGAGCGCTCCGGCGTGCTCAATCTCGGCGTCGAGGGCATGATGATCATGGGCGCGGTCGGCGGCTTCGGGGCCGGCT ACCTGACCGGCTCGCCCTGGATCGGCCTATTGGCGGCGATCGCCATGGGGGCGTTGTTCTCGCTGCTGTTCGCCGTCATG ACTCTGTCGCTGGCCACCAACCAAGTGGCGACCGGCCTGTCGCTGACGCTGCTCGGCCTCGGCCTCTCCGGCATGATCGG CACGAGCTTCGTCGGCCAGCCCGGCGTCAGGCTGCCCAATCTCGACATTCCCGGCCTGAGCTCCATCCCGGTTGTCGGCA AGCTGCTGTTCGGCCAGGATCCGGTGTTCTACATCTCGATCGTGCTGACCGCCGCCGTCATGTGGTTCCTGTTCAAGACG CGAACCGGACTGACGCTGCGCTCGATCGGCGACAGCCACACCTCGGCGCATGCGCTCGGCATCAAGGTCATCCGCTACCG CTATTTGGCGGTGATCTTCGGTGGCGCCTGCGCCGGTCTCGCCGGCGGCCATCTGTCGCTGGTCTACACGCCGCAATGGG TCGAGAACATGACCGCGGGCCGCGGCTGGATCGCCTTGGCGCTCGTCGTGTTTGCGTCGTGGCGGCCGTGGCGGGTGCTG GCCGGCGCCTACATCTTCGGCGCGGTGTGGATCGGCCAGCTTCATGCACAGGCTTTTGGCATTCCGGTGCCCTCGCAGAT GCTTTCTTCTCTGCCCTATCTGGCAACCGTCGTGGTTCTCGTTCTAATCTCGCGCAACAAGCGTCTGACGATGATGAACA CGCCGGCATCCCTGGGGCAGCCATTCGTTCCGGATCGTTGA
Upstream 100 bases:
>100_bases CGCTCATCCACTACCGCATCCGCCTGATCGGCATGGCGCTGACGAAACAGGAAGGCACGGCGAAGCTGGACGCCGCGCCG AAGTTGAAGGAAGCCCGCTG
Downstream 100 bases:
>100_bases CAAAAACAAAAAGACGGGAAGCTCCAAGGCTTAACACAGAGAGGTAACACGATGAAAAAACTGCTTATTGCCCTGATGAC GACGACAGCGGCATTGTCGC
Product: permease protein of sugar ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MDITVNILLTIATAATPLLIAAIGELVVERSGVLNLGVEGMMIMGAVGGFGAGYLTGSPWIGLLAAIAMGALFSLLFAVM TLSLATNQVATGLSLTLLGLGLSGMIGTSFVGQPGVRLPNLDIPGLSSIPVVGKLLFGQDPVFYISIVLTAAVMWFLFKT RTGLTLRSIGDSHTSAHALGIKVIRYRYLAVIFGGACAGLAGGHLSLVYTPQWVENMTAGRGWIALALVVFASWRPWRVL AGAYIFGAVWIGQLHAQAFGIPVPSQMLSSLPYLATVVVLVLISRNKRLTMMNTPASLGQPFVPDR
Sequences:
>Translated_306_residues MDITVNILLTIATAATPLLIAAIGELVVERSGVLNLGVEGMMIMGAVGGFGAGYLTGSPWIGLLAAIAMGALFSLLFAVM TLSLATNQVATGLSLTLLGLGLSGMIGTSFVGQPGVRLPNLDIPGLSSIPVVGKLLFGQDPVFYISIVLTAAVMWFLFKT RTGLTLRSIGDSHTSAHALGIKVIRYRYLAVIFGGACAGLAGGHLSLVYTPQWVENMTAGRGWIALALVVFASWRPWRVL AGAYIFGAVWIGQLHAQAFGIPVPSQMLSSLPYLATVVVLVLISRNKRLTMMNTPASLGQPFVPDR >Mature_306_residues MDITVNILLTIATAATPLLIAAIGELVVERSGVLNLGVEGMMIMGAVGGFGAGYLTGSPWIGLLAAIAMGALFSLLFAVM TLSLATNQVATGLSLTLLGLGLSGMIGTSFVGQPGVRLPNLDIPGLSSIPVVGKLLFGQDPVFYISIVLTAAVMWFLFKT RTGLTLRSIGDSHTSAHALGIKVIRYRYLAVIFGGACAGLAGGHLSLVYTPQWVENMTAGRGWIALALVVFASWRPWRVL AGAYIFGAVWIGQLHAQAFGIPVPSQMLSSLPYLATVVVLVLISRNKRLTMMNTPASLGQPFVPDR
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32153; Mature: 32153
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDITVNILLTIATAATPLLIAAIGELVVERSGVLNLGVEGMMIMGAVGGFGAGYLTGSPW CCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCCCCCCCCCCH IGLLAAIAMGALFSLLFAVMTLSLATNQVATGLSLTLLGLGLSGMIGTSFVGQPGVRLPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCCCCCCCCCCCCC LDIPGLSSIPVVGKLLFGQDPVFYISIVLTAAVMWFLFKTRTGLTLRSIGDSHTSAHALG CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHH IKVIRYRYLAVIFGGACAGLAGGHLSLVYTPQWVENMTAGRGWIALALVVFASWRPWRVL HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCCHHHH AGAYIFGAVWIGQLHAQAFGIPVPSQMLSSLPYLATVVVLVLISRNKRLTMMNTPASLGQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCHHHCC PFVPDR CCCCCC >Mature Secondary Structure MDITVNILLTIATAATPLLIAAIGELVVERSGVLNLGVEGMMIMGAVGGFGAGYLTGSPW CCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCCCCCCCCCCH IGLLAAIAMGALFSLLFAVMTLSLATNQVATGLSLTLLGLGLSGMIGTSFVGQPGVRLPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCCCCCCCCCCCCC LDIPGLSSIPVVGKLLFGQDPVFYISIVLTAAVMWFLFKTRTGLTLRSIGDSHTSAHALG CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHH IKVIRYRYLAVIFGGACAGLAGGHLSLVYTPQWVENMTAGRGWIALALVVFASWRPWRVL HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCCHHHH AGAYIFGAVWIGQLHAQAFGIPVPSQMLSSLPYLATVVVLVLISRNKRLTMMNTPASLGQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCHHHCC PFVPDR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]