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The map label for this gene is yufP [H]

Identifier: 13470722

GI number: 13470722

Start: 370577

End: 371704

Strand: Reverse

Name: yufP [H]

Synonym: mll0503

Alternate gene names: 13470722

Gene position: 371704-370577 (Counterclockwise)

Preceding gene: 13470723

Following gene: 13470721

Centisome position: 5.28

GC content: 64.45

Gene sequence:

>1128_bases
ATGCGCCTCGAACTCGTCAAACGCCCGCAGCGCTCCGCGCTGTTTTCGGCCCTGTCGCCGTTCATCGCCTTCGCGCTGAC
GATCATCGCCGGCGCGGTTCTGTTCGCGCTGCTCGGTGTCAATCCGCTGACCGCGTTCCGGATCTACTTCATCGAACCGA
TCAGCCAGGTCTGGCAACTGCATGAGCTGGCGATCAAGGCGGCACCGCTGATCCTGATCGCGGTCGGCCTCTCGGTCTGC
TACAAAGCCAACATCTGGAACATCGGCGCCGAGGGCCAGTTTATTTTCGGCGCCATCTTCGGCTCCGCCATTCCGGTGCT
GTTCCCGCAATTCGAAGGGCCGCTGGTGCTGCCGCTGATGCTTTTGCTCGGCATGGTCGGCGGCGCCGCCTATGCGGCGA
TACCCGCCTTTCTGAAGACCCGCTTCAACACCAACGAGATCTTGACCAGCCTGATGCTGGTCTATGTCGCGCAGCTCTTC
CTCGACTGGCTGGTGCGCGGTCCCTGGCGCGATCCGCAGGGCCACGGTTTCCCGCAGACGATCCAGTTCGGCGACTCCGC
CGTGCTGCCGGAATTGATGCCGGACGCCGGACGTGCCAATTGGGGCTTTGTGTTTGCGCTGGTTGCCGCGGTGCTGATCT
GGATCCTGATGGGACGCATGCTGAAGGGCTTCGAGGTGCGGGTGCTGGGTTCCAGCCCGCGGGCCGGGCGCTTCGCCGGT
TTCGGCCTCAGCCGCATGGTGTTCTTCGCCTTCCTGCTGTCGGGCGCGCTGGCCGGACTTGCCGGCATTTCGGAAGTCTC
CGGCGCCATCGGACAGTTGCAGCCGGTTATTTCTCCCGGCTACGGCTTCACCGCCATCATCGTGGCGTTCCTCGGCCGCC
TCAATCCGCTCGGCATCATCGCCGCGGGCCTGGTCCTGGCGCTGACCTATCTCGGCGGCGAGGCGGTGCAAAGCGCTCTC
GGCATTTCCGACAAGGTGGCGCGGGTGTTCCAGGGCATGCTTTTGTTCTTCGTGCTCGGCTGCGACACGCTCATCCACTA
CCGCATCCGCCTGATCGGCATGGCGCTGACGAAACAGGAAGGCACGGCGAAGCTGGACGCCGCGCCGAAGTTGAAGGAAG
CCCGCTGA

Upstream 100 bases:

>100_bases
CCAAGCCGATGCCGATCGCCGAAGCAACCTTCGAGAAGGTCGGCCTGCTGATGGGCGGCGCCGAGCCCGGCCACGCCGAA
CATACGCTGGAGACGGCATG

Downstream 100 bases:

>100_bases
TGGACATCACCGTCAACATCCTCTTGACCATCGCAACGGCCGCAACGCCGCTTTTGATCGCGGCGATCGGCGAACTGGTG
GTCGAGCGCTCCGGCGTGCT

Product: permease protein of sugar ABC transporter

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRLELVKRPQRSALFSALSPFIAFALTIIAGAVLFALLGVNPLTAFRIYFIEPISQVWQLHELAIKAAPLILIAVGLSVC
YKANIWNIGAEGQFIFGAIFGSAIPVLFPQFEGPLVLPLMLLLGMVGGAAYAAIPAFLKTRFNTNEILTSLMLVYVAQLF
LDWLVRGPWRDPQGHGFPQTIQFGDSAVLPELMPDAGRANWGFVFALVAAVLIWILMGRMLKGFEVRVLGSSPRAGRFAG
FGLSRMVFFAFLLSGALAGLAGISEVSGAIGQLQPVISPGYGFTAIIVAFLGRLNPLGIIAAGLVLALTYLGGEAVQSAL
GISDKVARVFQGMLLFFVLGCDTLIHYRIRLIGMALTKQEGTAKLDAAPKLKEAR

Sequences:

>Translated_375_residues
MRLELVKRPQRSALFSALSPFIAFALTIIAGAVLFALLGVNPLTAFRIYFIEPISQVWQLHELAIKAAPLILIAVGLSVC
YKANIWNIGAEGQFIFGAIFGSAIPVLFPQFEGPLVLPLMLLLGMVGGAAYAAIPAFLKTRFNTNEILTSLMLVYVAQLF
LDWLVRGPWRDPQGHGFPQTIQFGDSAVLPELMPDAGRANWGFVFALVAAVLIWILMGRMLKGFEVRVLGSSPRAGRFAG
FGLSRMVFFAFLLSGALAGLAGISEVSGAIGQLQPVISPGYGFTAIIVAFLGRLNPLGIIAAGLVLALTYLGGEAVQSAL
GISDKVARVFQGMLLFFVLGCDTLIHYRIRLIGMALTKQEGTAKLDAAPKLKEAR
>Mature_375_residues
MRLELVKRPQRSALFSALSPFIAFALTIIAGAVLFALLGVNPLTAFRIYFIEPISQVWQLHELAIKAAPLILIAVGLSVC
YKANIWNIGAEGQFIFGAIFGSAIPVLFPQFEGPLVLPLMLLLGMVGGAAYAAIPAFLKTRFNTNEILTSLMLVYVAQLF
LDWLVRGPWRDPQGHGFPQTIQFGDSAVLPELMPDAGRANWGFVFALVAAVLIWILMGRMLKGFEVRVLGSSPRAGRFAG
FGLSRMVFFAFLLSGALAGLAGISEVSGAIGQLQPVISPGYGFTAIIVAFLGRLNPLGIIAAGLVLALTYLGGEAVQSAL
GISDKVARVFQGMLLFFVLGCDTLIHYRIRLIGMALTKQEGTAKLDAAPKLKEAR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 40267; Mature: 40267

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLELVKRPQRSALFSALSPFIAFALTIIAGAVLFALLGVNPLTAFRIYFIEPISQVWQL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
HELAIKAAPLILIAVGLSVCYKANIWNIGAEGQFIFGAIFGSAIPVLFPQFEGPLVLPLM
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
LLLGMVGGAAYAAIPAFLKTRFNTNEILTSLMLVYVAQLFLDWLVRGPWRDPQGHGFPQT
HHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IQFGDSAVLPELMPDAGRANWGFVFALVAAVLIWILMGRMLKGFEVRVLGSSPRAGRFAG
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
FGLSRMVFFAFLLSGALAGLAGISEVSGAIGQLQPVISPGYGFTAIIVAFLGRLNPLGII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHH
AAGLVLALTYLGGEAVQSALGISDKVARVFQGMLLFFVLGCDTLIHYRIRLIGMALTKQE
HHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTAKLDAAPKLKEAR
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLELVKRPQRSALFSALSPFIAFALTIIAGAVLFALLGVNPLTAFRIYFIEPISQVWQL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
HELAIKAAPLILIAVGLSVCYKANIWNIGAEGQFIFGAIFGSAIPVLFPQFEGPLVLPLM
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
LLLGMVGGAAYAAIPAFLKTRFNTNEILTSLMLVYVAQLFLDWLVRGPWRDPQGHGFPQT
HHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IQFGDSAVLPELMPDAGRANWGFVFALVAAVLIWILMGRMLKGFEVRVLGSSPRAGRFAG
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
FGLSRMVFFAFLLSGALAGLAGISEVSGAIGQLQPVISPGYGFTAIIVAFLGRLNPLGII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHH
AAGLVLALTYLGGEAVQSALGISDKVARVFQGMLLFFVLGCDTLIHYRIRLIGMALTKQE
HHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTAKLDAAPKLKEAR
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]