| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470720
Identifier: 13470720
GI number: 13470720
Start: 368538
End: 369605
Strand: Reverse
Name: 13470720
Synonym: mll0501
Alternate gene names: NA
Gene position: 369605-368538 (Counterclockwise)
Preceding gene: 13470721
Following gene: 13470713
Centisome position: 5.25
GC content: 61.7
Gene sequence:
>1068_bases ATGAAAAAACTGCTTATTGCCCTGATGACGACGACAGCGGCATTGTCGCTGGCCGCGTCCGCAGAGGCTGCCGACAAGTT GAAGGCCTGCTGGGTCTATACCGGCCCGATCGGCGATTTCGGCTACTCCTACCAGCACGACCAGGGCCGGCTCGAAGTCG AGAAGGCGCTCGGCGACAAGGTCGAGACCGCCTATCTGGAGAACGTCTCCGAAGGTCCCGATGCCGACCGTGCTTTCGAG CGCCTGGCGCGCGAAGGCTGCAAGATCATCTTCGGGACGTCGTTCGGCTTCATGGACGCCGAGGTGAAGGTCGCCAAGAA ATTCCCGAAAGTGATGTTCGAGCACGCCACCGGCTACAAGACGGGTGACAATCTCGGCATCTACAATGCCCGCTTCTATG AAGGCCGCTACGTACTCGGCCAGATTGCCGCCAAGGAATCGAAGTCCGGCGTCGCCGGTTACATCGTGTCCTTCCCGATC CCGGAAGTGGTAATGGGCATCAACTCCTTCATGCTCGGCGCGCAGTCGATCAATCCGAACTTCAAGGCCAAGATCGTCTG GGTCAACTCATGGTTCGATCCGGGCAAGGAAGCCGACGCCGCCAAGGCGCTGTTCGACCAGGGCGCCGACATCATCGTCC AGCACACCGACTCGACCGCCGCCCTGCAGGTCGCCGAGGAGCGCAAGCTGCATGGCTTCGGCCAGTCGTCCGACATGATC AAGTTCGCGCCGAATGCGCAGCTGACCTCGCTGACCGACGAATGGGGCCCGTACTACATCAGCCGGGTACAGGCAGCCAT CGACGGCACCTGGAAGCCGGACAATGTCTGGCTCGGCATCAAGGACGGCGCGGTCAAGCTCGCGCCCTACACCAACATGC CCGACGACGTGAAGGCTCTGGCCGAGGCGACCGAGAAGAAAATCGCCGGCGGCTGGAACCCCTTTACCGGACCGATCGCC AAGCAGGACGGCACACCGTGGCTGAAGGACGGTGAAGTCGCCGATGACGGCACGCTGCTCGGCATGAATTTCTACGTGAA GGGCGTCGACGACAAGCTGCCGCAGTAA
Upstream 100 bases:
>100_bases GATGAACACGCCGGCATCCCTGGGGCAGCCATTCGTTCCGGATCGTTGACAAAAACAAAAAGACGGGAAGCTCCAAGGCT TAACACAGAGAGGTAACACG
Downstream 100 bases:
>100_bases GCGGAGCATCACATTTCGAATGAAAAGGGCGCCGCGAGGCGCCCTTTTCATTTGCCGGGAGAAAGTGACGGAACGCTCAG ACGGCCGAACCGTAGAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; ABC Transporter Periplasmic/Surface Lipoprotein; Basic Membrane Protein Family Protein; ABC Transporter; Lipoprotein Periplasmic Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Tat Pathway Signal Sequence/Basic Membrane Protein; Twin-Arginine Translocation Pathway Signal; Basic Membrane Lipoprotein Family Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; Outer Membrane Lipoprotein; ABC-Type Transport Periplasmic Component
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKKLLIALMTTTAALSLAASAEAADKLKACWVYTGPIGDFGYSYQHDQGRLEVEKALGDKVETAYLENVSEGPDADRAFE RLAREGCKIIFGTSFGFMDAEVKVAKKFPKVMFEHATGYKTGDNLGIYNARFYEGRYVLGQIAAKESKSGVAGYIVSFPI PEVVMGINSFMLGAQSINPNFKAKIVWVNSWFDPGKEADAAKALFDQGADIIVQHTDSTAALQVAEERKLHGFGQSSDMI KFAPNAQLTSLTDEWGPYYISRVQAAIDGTWKPDNVWLGIKDGAVKLAPYTNMPDDVKALAEATEKKIAGGWNPFTGPIA KQDGTPWLKDGEVADDGTLLGMNFYVKGVDDKLPQ
Sequences:
>Translated_355_residues MKKLLIALMTTTAALSLAASAEAADKLKACWVYTGPIGDFGYSYQHDQGRLEVEKALGDKVETAYLENVSEGPDADRAFE RLAREGCKIIFGTSFGFMDAEVKVAKKFPKVMFEHATGYKTGDNLGIYNARFYEGRYVLGQIAAKESKSGVAGYIVSFPI PEVVMGINSFMLGAQSINPNFKAKIVWVNSWFDPGKEADAAKALFDQGADIIVQHTDSTAALQVAEERKLHGFGQSSDMI KFAPNAQLTSLTDEWGPYYISRVQAAIDGTWKPDNVWLGIKDGAVKLAPYTNMPDDVKALAEATEKKIAGGWNPFTGPIA KQDGTPWLKDGEVADDGTLLGMNFYVKGVDDKLPQ >Mature_355_residues MKKLLIALMTTTAALSLAASAEAADKLKACWVYTGPIGDFGYSYQHDQGRLEVEKALGDKVETAYLENVSEGPDADRAFE RLAREGCKIIFGTSFGFMDAEVKVAKKFPKVMFEHATGYKTGDNLGIYNARFYEGRYVLGQIAAKESKSGVAGYIVSFPI PEVVMGINSFMLGAQSINPNFKAKIVWVNSWFDPGKEADAAKALFDQGADIIVQHTDSTAALQVAEERKLHGFGQSSDMI KFAPNAQLTSLTDEWGPYYISRVQAAIDGTWKPDNVWLGIKDGAVKLAPYTNMPDDVKALAEATEKKIAGGWNPFTGPIA KQDGTPWLKDGEVADDGTLLGMNFYVKGVDDKLPQ
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38665; Mature: 38665
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLIALMTTTAALSLAASAEAADKLKACWVYTGPIGDFGYSYQHDQGRLEVEKALGDK CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCH VETAYLENVSEGPDADRAFERLAREGCKIIFGTSFGFMDAEVKVAKKFPKVMFEHATGYK HHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC TGDNLGIYNARFYEGRYVLGQIAAKESKSGVAGYIVSFPIPEVVMGINSFMLGAQSINPN CCCCCCEEEEEEECCCEEEEHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHEECCCCCCC FKAKIVWVNSWFDPGKEADAAKALFDQGADIIVQHTDSTAALQVAEERKLHGFGQSSDMI CEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCHHEEHHHHHHHHCCCCCCCCEE KFAPNAQLTSLTDEWGPYYISRVQAAIDGTWKPDNVWLGIKDGAVKLAPYTNMPDDVKAL EECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCHHHHHH AEATEKKIAGGWNPFTGPIAKQDGTPWLKDGEVADDGTLLGMNFYVKGVDDKLPQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC >Mature Secondary Structure MKKLLIALMTTTAALSLAASAEAADKLKACWVYTGPIGDFGYSYQHDQGRLEVEKALGDK CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCH VETAYLENVSEGPDADRAFERLAREGCKIIFGTSFGFMDAEVKVAKKFPKVMFEHATGYK HHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC TGDNLGIYNARFYEGRYVLGQIAAKESKSGVAGYIVSFPIPEVVMGINSFMLGAQSINPN CCCCCCEEEEEEECCCEEEEHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHEECCCCCCC FKAKIVWVNSWFDPGKEADAAKALFDQGADIIVQHTDSTAALQVAEERKLHGFGQSSDMI CEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCHHEEHHHHHHHHCCCCCCCCEE KFAPNAQLTSLTDEWGPYYISRVQAAIDGTWKPDNVWLGIKDGAVKLAPYTNMPDDVKAL EECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCHHHHHH AEATEKKIAGGWNPFTGPIAKQDGTPWLKDGEVADDGTLLGMNFYVKGVDDKLPQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA