| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470481
Identifier: 13470481
GI number: 13470481
Start: 136561
End: 137007
Strand: Direct
Name: 13470481
Synonym: mlr0200
Alternate gene names: NA
Gene position: 136561-137007 (Clockwise)
Preceding gene: 13470480
Following gene: 13470488
Centisome position: 1.94
GC content: 59.73
Gene sequence:
>447_bases GTGGCCACCATGCGTTGGACCACAGACGACCGCGCATCGACGCGCCCGGAGGATATTTCGATGTCGGACACCAAGCGAAT CACGGCCAGCAAGAAAGAACTGCTGGAACTCGAAAAAGGGTTCTGGACCGGCGACGCGGCCTATTACGCGGCCAATGCCG ATACGGAATGCCTGGTGGCCTTTCCGCAAATGGCAAAGGCGATGGACAATGCCGACTTGGCCAAGACCGCGACCAAACCC AATCGCTGGCGCGATCTCGATATCGAGCTCAAGGGAATAATCGAGCCTGGCAGCGACATCATCATGCTGACCTATGAGGC GCATGCGACACGCGAGAACGGCGAACCCTACGCCGCGCTGGTCAGCACCGGCTATGTCCATCGCGTCAACGGCTGGAAGA TGATGTTCCACTCGCAGACGCCGATCGAGGTAGCGGCCGCGAAGTAG
Upstream 100 bases:
>100_bases CAAACCAGCCGCCGCCAAGCCTGCGGCCAGCCCGGATGCGGAACAGCCCGATCCCACGCAACCGGATACATCAGACGCCA ACTGATCCCTGGGAACCGTC
Downstream 100 bases:
>100_bases GGCCCAATCCCTACGGAAAAAAGATAGCCTCGCCCTTCAGTGCTTCGGCCAACATCTTCTCATACTTGCCGCGCGGGACG TCGACAGCGCCGAAGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MATMRWTTDDRASTRPEDISMSDTKRITASKKELLELEKGFWTGDAAYYAANADTECLVAFPQMAKAMDNADLAKTATKP NRWRDLDIELKGIIEPGSDIIMLTYEAHATRENGEPYAALVSTGYVHRVNGWKMMFHSQTPIEVAAAK
Sequences:
>Translated_148_residues MATMRWTTDDRASTRPEDISMSDTKRITASKKELLELEKGFWTGDAAYYAANADTECLVAFPQMAKAMDNADLAKTATKP NRWRDLDIELKGIIEPGSDIIMLTYEAHATRENGEPYAALVSTGYVHRVNGWKMMFHSQTPIEVAAAK >Mature_147_residues ATMRWTTDDRASTRPEDISMSDTKRITASKKELLELEKGFWTGDAAYYAANADTECLVAFPQMAKAMDNADLAKTATKPN RWRDLDIELKGIIEPGSDIIMLTYEAHATRENGEPYAALVSTGYVHRVNGWKMMFHSQTPIEVAAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16548; Mature: 16417
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATMRWTTDDRASTRPEDISMSDTKRITASKKELLELEKGFWTGDAAYYAANADTECLVA CCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE FPQMAKAMDNADLAKTATKPNRWRDLDIELKGIIEPGSDIIMLTYEAHATRENGEPYAAL CHHHHHHCCCCCHHHCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEE VSTGYVHRVNGWKMMFHSQTPIEVAAAK EECCEEEECCCEEEEEECCCCEEEEECC >Mature Secondary Structure ATMRWTTDDRASTRPEDISMSDTKRITASKKELLELEKGFWTGDAAYYAANADTECLVA CCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE FPQMAKAMDNADLAKTATKPNRWRDLDIELKGIIEPGSDIIMLTYEAHATRENGEPYAAL CHHHHHHCCCCCHHHCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEE VSTGYVHRVNGWKMMFHSQTPIEVAAAK EECCEEEECCCEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA