Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470432

Identifier: 13470432

GI number: 13470432

Start: 98264

End: 98656

Strand: Direct

Name: 13470432

Synonym: mlr0138

Alternate gene names: NA

Gene position: 98264-98656 (Clockwise)

Preceding gene: 13470429

Following gene: 13470437

Centisome position: 1.4

GC content: 60.81

Gene sequence:

>393_bases
GTGAGCAATCTGGTCGGCCTCGAAAAACCTGTCGGGCCGATATGCCAGATATCAGCCGTAATGCAGCTTCGGCTTCGGCT
CGGTGCCGGTGAACTGCACGCCGACCCGGTCGTTGCGGCGCCAGCGGACCTCGCAGCGATAGGCGACGCCGTCGAGCGGC
ACATAAAGCAGGAAACGATCGGGCACCCGCGCCTCGATCGGTATTTTCAATTCGGCGCCGCCCGCATGCTGGTTGCGCAG
CGTCACGGCGATTTCCGAGTTTTGAATCCCGGTGATAACGGTTCCACCCTTGAGCACGCGTGGACGGTGCTCGCGCTCGG
GCTCGCCGGTATGTTGCTGAATTGGGTCTACAGGATTCGCCATCGATCAAACGCCAGATTGGTCGATTCTTAG

Upstream 100 bases:

>100_bases
TGTGTGCCACACATGTGGATAACGGGGATAGAAATGCGCCGCCGCGATTGCCGTTTCGAACGGTGGATCTGCGGCCTTTG
ACCGCCGGGAGGCGTCGATC

Downstream 100 bases:

>100_bases
CGAAGAAGGATTAGCAAACCTTTCATGCTCGACACATCACAGGGTTGTTAATATGCCCTGGAGGTCACCTAGGAGAATCT
GTGCGGGTCGGCGCAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETIGHPRLDRYFQFGAARMLVAQ
RHGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIRHRSNARLVDS

Sequences:

>Translated_130_residues
MSNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETIGHPRLDRYFQFGAARMLVAQ
RHGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIRHRSNARLVDS
>Mature_129_residues
SNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETIGHPRLDRYFQFGAARMLVAQR
HGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIRHRSNARLVDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14239; Mature: 14108

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHC
GHPRLDRYFQFGAARMLVAQRHGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIR
CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HRSNARLVDS
HCCCCCCCCC
>Mature Secondary Structure 
SNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHC
GHPRLDRYFQFGAARMLVAQRHGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIR
CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HRSNARLVDS
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA