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The map label for this gene is sufD [C]

Identifier: 13470345

GI number: 13470345

Start: 17309

End: 18601

Strand: Direct

Name: sufD [C]

Synonym: mlr0020

Alternate gene names: 13470345

Gene position: 17309-18601 (Clockwise)

Preceding gene: 13470344

Following gene: 13470346

Centisome position: 0.25

GC content: 64.04

Gene sequence:

>1293_bases
ATGCCAGAAGGCAAGGTCAAACTGATGAATATGCACACACAACCGCAGCGGACACCGGCTGAAACAGCGTTGATCGACGC
GTTCGGCGACCGGCTGTCGCTGCTGCCGGGTGACGGCGCGGTGATGCTGAAGCGCGACGACGCGATCGAGGCGATCAAGC
ACGGCCTGCCGACCCGGCGCGTCGAATCCTGGCATTACACGGACCTGCGCCGGCTGTTGAGCGTGGTGCCGGACTTCGAC
CCCGCCGCCATGGCCAAGGCCATCGCGCCGATCGTCGAAGGCTCCGCCGTTCTCCCGGTCCTGAACGGCAAGTCCGACGC
CAAGGTGCCGGCGCTTGACGGTGTCACCGTGCAAAGCCTGTCGGAAAAGCTGATTGATGGCAGCATCGCGCCGGGCCTCG
ATTCCTATGGCAGCGACGATGCGATCGGCGCGCTGAACACCGCCTTCGTTGCCGATGGTTATTTTGTCGACATCGCCGAC
GGCACGGAACTCGAAAAGCCGATCGAACTGCAGAATGTGCAGGCCGGCGGCCAGACCCATGTGCGCTTGGCCGTTCGCGT
CGGCGCCGGCGCCAAGGCCGTCATCGTCGAGCGTCAGGCGGGTGATGGCGCCGCGCTGGTCAGTTCGGTCAGCCAGCTGG
TGCTTGGCGAGGACGCCGAGGTGACGTGGCTGATCGTCCAGGAGCAGCCGGACACGGCGACGCATCTGGCGCAGTTCAAG
GCCCATATCGGCAAGAACGCGAAGCTGACGCTGTTCGTGATGAACGCCGGCGGCAAGCTTGTGCGCCAGGAGGTCATGGT
CAAGACGACTGGCGAAGGCGCCGATTTCAAGCTGCGCGGCATCAACCTTCTGGCCGGCGATACCCATAGCGACGTGACGA
TGGTGCTCGACCACGCCGTGCCGCACACGACCTCGACCGAGGTCATCCGCAACGTGGTGACGGGCAAGGCGCGCGGCGTC
TTCCAGGGTCGTATCAACGTCCACCAATATGCGCAGAAGACCAACGCCAAGATGGCCTGCAACACGCTGCTGTTGTCGGA
CGATGGCGAGTTCTCGACCAAGCCGGAGCTCGAAATCTTCGCCGACGACGTTGTCTGCGGCCACGGCGCGACGGTGACCG
AGATCGACCACGACCATCTGTTCTACCTGATGGCGCGCGGTGTCGACGAGAAGTCGGCCCGTGGTCTGCTGGTCAAGGCC
TTCGTGGCCGAGGTGATCGAGGAACTGGACGACGAGACGATCGTCGAGGCGCTGGAAGCGAGACTCGACGAATGGTTTGT
GACGCATGGGTGA

Upstream 100 bases:

>100_bases
GTGCTCTACAGAGGCCAGGTCATCAAGTCCGGCGACAAGTCGCTGGCGCTTGACCTCGAGGCCAATGGCTATGCCGGCGT
GATCGGCGAAGCCGCGTGAG

Downstream 100 bases:

>100_bases
GGAGCGGTCGGCGTAGCCGACAAAAAGCCAACGATTTGGCTTTTTGAGCGACGAACGCCCGGAGCCATAGCGAAGGGCCG
GCTGACGCGGCCGGGTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MPEGKVKLMNMHTQPQRTPAETALIDAFGDRLSLLPGDGAVMLKRDDAIEAIKHGLPTRRVESWHYTDLRRLLSVVPDFD
PAAMAKAIAPIVEGSAVLPVLNGKSDAKVPALDGVTVQSLSEKLIDGSIAPGLDSYGSDDAIGALNTAFVADGYFVDIAD
GTELEKPIELQNVQAGGQTHVRLAVRVGAGAKAVIVERQAGDGAALVSSVSQLVLGEDAEVTWLIVQEQPDTATHLAQFK
AHIGKNAKLTLFVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHSDVTMVLDHAVPHTTSTEVIRNVVTGKARGV
FQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKA
FVAEVIEELDDETIVEALEARLDEWFVTHG

Sequences:

>Translated_430_residues
MPEGKVKLMNMHTQPQRTPAETALIDAFGDRLSLLPGDGAVMLKRDDAIEAIKHGLPTRRVESWHYTDLRRLLSVVPDFD
PAAMAKAIAPIVEGSAVLPVLNGKSDAKVPALDGVTVQSLSEKLIDGSIAPGLDSYGSDDAIGALNTAFVADGYFVDIAD
GTELEKPIELQNVQAGGQTHVRLAVRVGAGAKAVIVERQAGDGAALVSSVSQLVLGEDAEVTWLIVQEQPDTATHLAQFK
AHIGKNAKLTLFVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHSDVTMVLDHAVPHTTSTEVIRNVVTGKARGV
FQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKA
FVAEVIEELDDETIVEALEARLDEWFVTHG
>Mature_429_residues
PEGKVKLMNMHTQPQRTPAETALIDAFGDRLSLLPGDGAVMLKRDDAIEAIKHGLPTRRVESWHYTDLRRLLSVVPDFDP
AAMAKAIAPIVEGSAVLPVLNGKSDAKVPALDGVTVQSLSEKLIDGSIAPGLDSYGSDDAIGALNTAFVADGYFVDIADG
TELEKPIELQNVQAGGQTHVRLAVRVGAGAKAVIVERQAGDGAALVSSVSQLVLGEDAEVTWLIVQEQPDTATHLAQFKA
HIGKNAKLTLFVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHSDVTMVLDHAVPHTTSTEVIRNVVTGKARGVF
QGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKAF
VAEVIEELDDETIVEALEARLDEWFVTHG

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=388, Percent_Identity=28.3505154639175, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI87081955, Length=312, Percent_Identity=22.7564102564103, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46120; Mature: 45989

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEGKVKLMNMHTQPQRTPAETALIDAFGDRLSLLPGDGAVMLKRDDAIEAIKHGLPTRR
CCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEECCHHHHHHHCCCCCCC
VESWHYTDLRRLLSVVPDFDPAAMAKAIAPIVEGSAVLPVLNGKSDAKVPALDGVTVQSL
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHH
SEKLIDGSIAPGLDSYGSDDAIGALNTAFVADGYFVDIADGTELEKPIELQNVQAGGQTH
HHHHHCCCCCCCCCCCCCCCCCHHHHHEEEECCEEEEECCCCCCCCCCCEEEECCCCCEE
VRLAVRVGAGAKAVIVERQAGDGAALVSSVSQLVLGEDAEVTWLIVQEQPDTATHLAQFK
EEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH
AHIGKNAKLTLFVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHSDVTMVLDHAV
HHHCCCCEEEEEEECCCCHHHHHEEEEEECCCCCCEEEEEEEEEECCCCCCHHEEEECCC
PHTTSTEVIRNVVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIF
CCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEE
ADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDETIVEALEA
ECCEEECCCCEEEEECCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
RLDEWFVTHG
HHHHHEECCC
>Mature Secondary Structure 
PEGKVKLMNMHTQPQRTPAETALIDAFGDRLSLLPGDGAVMLKRDDAIEAIKHGLPTRR
CCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEECCHHHHHHHCCCCCCC
VESWHYTDLRRLLSVVPDFDPAAMAKAIAPIVEGSAVLPVLNGKSDAKVPALDGVTVQSL
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHH
SEKLIDGSIAPGLDSYGSDDAIGALNTAFVADGYFVDIADGTELEKPIELQNVQAGGQTH
HHHHHCCCCCCCCCCCCCCCCCHHHHHEEEECCEEEEECCCCCCCCCCCEEEECCCCCEE
VRLAVRVGAGAKAVIVERQAGDGAALVSSVSQLVLGEDAEVTWLIVQEQPDTATHLAQFK
EEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH
AHIGKNAKLTLFVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHSDVTMVLDHAV
HHHCCCCEEEEEEECCCCHHHHHEEEEEECCCCCCEEEEEEEEEECCCCCCHHEEEECCC
PHTTSTEVIRNVVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIF
CCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEE
ADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDETIVEALEA
ECCEEECCCCEEEEECCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
RLDEWFVTHG
HHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]