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The map label for this gene is sufC [C]

Identifier: 13470344

GI number: 13470344

Start: 16552

End: 17307

Strand: Direct

Name: sufC [C]

Synonym: mlr0019

Alternate gene names: 13470344

Gene position: 16552-17307 (Clockwise)

Preceding gene: 13470343

Following gene: 13470345

Centisome position: 0.24

GC content: 61.64

Gene sequence:

>756_bases
ATGCTTGAAATCAGAAACCTGCACGCCCGCATCGTCGATGACGGCACCGAAATCATCCGTGGCCTGAACCTTACGGTGAA
AGCCGGCGAGGTCGCCGCGATCATGGGGCCGAATGGCTCGGGCAAGTCGACGCTGTCCTATATCCTGGCCGGCCGCGAGG
ATTATGAGGTCACCGAAGGCGACATCCTCTACAACGGCCAGTCGATCCTCGAAATGGATCCGGCCGAGCGCGCCACGTCA
GGAATCTTCCTAGCCTTCCAGTATCCGATGGAGATACCGGGCGTGGCGACCATGGAATTCCTGAAAGTGGCCATGAACGA
GCAGCGCAAGGCGCGCGGCGAAGAGCCGTTGAAGATCCCGGAATTCTTGAAGCGGGTGAAGGAAGCCGCAGCCTCGCTCA
ACATGGACATGGCGATGCTGAAGCGGCCGCTCAATGTCGGCTTCTCCGGCGGTGAGAAGAAGCGCGCCGAGATCCTGCAG
ATGAAGCTGCTGGAGCCGAAACTCTGCGTGCTCGACGAGACCGATTCCGGCCTCGACATCGATGCGCTGAAGATCGTTTC
CGACGGCGTCAACGCGCTGCGCGCGCCGGACCGGGCCTTCCTGGTCATCACCCATTACCAGCGGCTGCTCGAGCACATCG
TGCCCGATAGCGTGCACGTGCTCTACAGAGGCCAGGTCATCAAGTCCGGCGACAAGTCGCTGGCGCTTGACCTCGAGGCC
AATGGCTATGCCGGCGTGATCGGCGAAGCCGCGTGA

Upstream 100 bases:

>100_bases
GACATCTGGTTTGCCGCCCGCTGTCGGCGGCTGTGGGCTCTGCAGCGCCGGCACACCGACTACACCGTCACTTACGACGA
CTATTTCAGAGAAAAGAAAA

Downstream 100 bases:

>100_bases
GATGCCAGAAGGCAAGGTCAAACTGATGAATATGCACACACAACCGCAGCGGACACCGGCTGAAACAGCGTTGATCGACG
CGTTCGGCGACCGGCTGTCG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLEIRNLHARIVDDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYILAGREDYEVTEGDILYNGQSILEMDPAERATS
GIFLAFQYPMEIPGVATMEFLKVAMNEQRKARGEEPLKIPEFLKRVKEAAASLNMDMAMLKRPLNVGFSGGEKKRAEILQ
MKLLEPKLCVLDETDSGLDIDALKIVSDGVNALRAPDRAFLVITHYQRLLEHIVPDSVHVLYRGQVIKSGDKSLALDLEA
NGYAGVIGEAA

Sequences:

>Translated_251_residues
MLEIRNLHARIVDDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYILAGREDYEVTEGDILYNGQSILEMDPAERATS
GIFLAFQYPMEIPGVATMEFLKVAMNEQRKARGEEPLKIPEFLKRVKEAAASLNMDMAMLKRPLNVGFSGGEKKRAEILQ
MKLLEPKLCVLDETDSGLDIDALKIVSDGVNALRAPDRAFLVITHYQRLLEHIVPDSVHVLYRGQVIKSGDKSLALDLEA
NGYAGVIGEAA
>Mature_251_residues
MLEIRNLHARIVDDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYILAGREDYEVTEGDILYNGQSILEMDPAERATS
GIFLAFQYPMEIPGVATMEFLKVAMNEQRKARGEEPLKIPEFLKRVKEAAASLNMDMAMLKRPLNVGFSGGEKKRAEILQ
MKLLEPKLCVLDETDSGLDIDALKIVSDGVNALRAPDRAFLVITHYQRLLEHIVPDSVHVLYRGQVIKSGDKSLALDLEA
NGYAGVIGEAA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=211, Percent_Identity=30.3317535545024, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=57.3770491803279, Blast_Score=286, Evalue=7e-79,
Organism=Escherichia coli, GI87082267, Length=167, Percent_Identity=37.125748502994, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789891, Length=222, Percent_Identity=31.0810810810811, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787370, Length=238, Percent_Identity=26.890756302521, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=26.6094420600858, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI87081834, Length=213, Percent_Identity=28.169014084507, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787758, Length=236, Percent_Identity=27.9661016949153, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789672, Length=216, Percent_Identity=26.8518518518519, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789962, Length=247, Percent_Identity=27.1255060728745, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI48995001, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081791, Length=181, Percent_Identity=30.939226519337, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790525, Length=215, Percent_Identity=27.906976744186, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789864, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI48994883, Length=231, Percent_Identity=30.3030303030303, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1790467, Length=163, Percent_Identity=28.2208588957055, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789963, Length=225, Percent_Identity=27.5555555555556, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1788761, Length=170, Percent_Identity=25.8823529411765, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=226, Percent_Identity=29.646017699115, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=227, Percent_Identity=28.6343612334802, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=216, Percent_Identity=28.2407407407407, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=214, Percent_Identity=27.5700934579439, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=229, Percent_Identity=27.5109170305677, Blast_Score=64, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=227, Percent_Identity=27.7533039647577, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI85724864, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580555, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85816269, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580553, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27453; Mature: 27453

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIRNLHARIVDDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYILAGREDYEVTEG
CCEECCCCEEEECCHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCC
DILYNGQSILEMDPAERATSGIFLAFQYPMEIPGVATMEFLKVAMNEQRKARGEEPLKIP
EEEECCCCEEEECCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
EFLKRVKEAAASLNMDMAMLKRPLNVGFSGGEKKRAEILQMKLLEPKLCVLDETDSGLDI
HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCH
DALKIVSDGVNALRAPDRAFLVITHYQRLLEHIVPDSVHVLYRGQVIKSGDKSLALDLEA
HHHHHHHHCHHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECEEEECCCCEEEEEEEC
NGYAGVIGEAA
CCCCCCCCCCC
>Mature Secondary Structure
MLEIRNLHARIVDDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYILAGREDYEVTEG
CCEECCCCEEEECCHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCC
DILYNGQSILEMDPAERATSGIFLAFQYPMEIPGVATMEFLKVAMNEQRKARGEEPLKIP
EEEECCCCEEEECCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
EFLKRVKEAAASLNMDMAMLKRPLNVGFSGGEKKRAEILQMKLLEPKLCVLDETDSGLDI
HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCH
DALKIVSDGVNALRAPDRAFLVITHYQRLLEHIVPDSVHVLYRGQVIKSGDKSLALDLEA
HHHHHHHHCHHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECEEEECCCCEEEEEEEC
NGYAGVIGEAA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]