| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is 134302787
Identifier: 134302787
GI number: 134302787
Start: 1880482
End: 1881462
Strand: Direct
Name: 134302787
Synonym: FTW_2008
Alternate gene names: NA
Gene position: 1880482-1881462 (Clockwise)
Preceding gene: 134302785
Following gene: 134302789
Centisome position: 99.05
GC content: 30.68
Gene sequence:
>981_bases ATGGTAAAAGTTATCTCTATCAATAATTTTACTAAAAATAAGTTTTCTAACCCTCCTGGTAGCCCTATGCGCAAAGGAGG AAGCAGAGATTTTTTAAAATTTATTTTTTCCTCTATGTTTAAAAAGCACAAAAAAGTTTTTCCTAGAGATCATGTTTTAG AAAAACAACAAGCTTTAGAGCAATTAAATAATGCTAGTAACTATAGTATTACTTGGTTGGGACATGCTGCTTTTTTGATT AAGCTTAATGAATATTTTATTATTACAGATCCTTTTTTGAGCAAGAATGCAGGACCTGGATTTTTAGGACCAAAGCGAGA AATATATTCTCCTTTAAATTTAAGTGATATTCCTAAAATTGATATGATTATTATTAGCCATAATCATTATGATCATTTAG ACTCAAAACTTATAAAAAACTTTCCAAATAAAGAAAATATAAAGGTAATAGTACCTATTGGGCTTAGTAGTTTCTTTATT AAAAGAGGTTTTAAAAATGTAACCGAAATGGGCTGGTGGCAGCAAATTGATATAAATGATATTACTATAGGCTGTTTACC ATGTGTTCACTTTTCTGGTCGAGGTTTATTTGATAGAAATAAAACTTTATGGGCAAGCTTCTCAATTAAAGATAAAAATA AAAAAGTATGGTTCTCTGGGGATACAGCTTATGGCGAAATATTTAAAGAAATTGGTAAAAAAGAAGAGTATTTTGATCTA GCTTTGATAGGCATAGGGGCATACGAGCCTCGTGATTTTATGTGCTCTGTACATGCTACTCCAGAAGAAGCAATTCAAAT AGCTAAAGATATCAAAGCAACAAAAACTATAGGCATGCACTGGGGAACTATCAGACTTACACCAGAACCTTTCTTTGAAC CTCCTAAAAGATTCAAACAAGCTGCAAAAGATCAAAAATATGGTCAAGAAAATGCTCTAATTTTAAAAATTGGTGAGACT ATAAATTTAGAGAACTATTAG
Upstream 100 bases:
>100_bases AATCAAAGATACTTGTAAAATCAGAGTATAATTTTTCAAAGTTTTTAGTTTTCATTATTGTTTCTAATGTAAAATAAATC TATACAACCAAATATACATT
Downstream 100 bases:
>100_bases ACTTGGTTAAAAATTAATTAGTAATCTAATACAATTAATAGCAATTACAAACATCAGAACTCCCGTAAGGCGCTCTATCC ACTGCCAAACAATTATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MVKVISINNFTKNKFSNPPGSPMRKGGSRDFLKFIFSSMFKKHKKVFPRDHVLEKQQALEQLNNASNYSITWLGHAAFLI KLNEYFIITDPFLSKNAGPGFLGPKREIYSPLNLSDIPKIDMIIISHNHYDHLDSKLIKNFPNKENIKVIVPIGLSSFFI KRGFKNVTEMGWWQQIDINDITIGCLPCVHFSGRGLFDRNKTLWASFSIKDKNKKVWFSGDTAYGEIFKEIGKKEEYFDL ALIGIGAYEPRDFMCSVHATPEEAIQIAKDIKATKTIGMHWGTIRLTPEPFFEPPKRFKQAAKDQKYGQENALILKIGET INLENY
Sequences:
>Translated_326_residues MVKVISINNFTKNKFSNPPGSPMRKGGSRDFLKFIFSSMFKKHKKVFPRDHVLEKQQALEQLNNASNYSITWLGHAAFLI KLNEYFIITDPFLSKNAGPGFLGPKREIYSPLNLSDIPKIDMIIISHNHYDHLDSKLIKNFPNKENIKVIVPIGLSSFFI KRGFKNVTEMGWWQQIDINDITIGCLPCVHFSGRGLFDRNKTLWASFSIKDKNKKVWFSGDTAYGEIFKEIGKKEEYFDL ALIGIGAYEPRDFMCSVHATPEEAIQIAKDIKATKTIGMHWGTIRLTPEPFFEPPKRFKQAAKDQKYGQENALILKIGET INLENY >Mature_326_residues MVKVISINNFTKNKFSNPPGSPMRKGGSRDFLKFIFSSMFKKHKKVFPRDHVLEKQQALEQLNNASNYSITWLGHAAFLI KLNEYFIITDPFLSKNAGPGFLGPKREIYSPLNLSDIPKIDMIIISHNHYDHLDSKLIKNFPNKENIKVIVPIGLSSFFI KRGFKNVTEMGWWQQIDINDITIGCLPCVHFSGRGLFDRNKTLWASFSIKDKNKKVWFSGDTAYGEIFKEIGKKEEYFDL ALIGIGAYEPRDFMCSVHATPEEAIQIAKDIKATKTIGMHWGTIRLTPEPFFEPPKRFKQAAKDQKYGQENALILKIGET INLENY
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To K.pneumoniae romA [H]
Homologues:
Organism=Homo sapiens, GI170932483, Length=264, Percent_Identity=40.9090909090909, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI170932481, Length=264, Percent_Identity=40.9090909090909, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI25148824, Length=306, Percent_Identity=37.2549019607843, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17543102, Length=306, Percent_Identity=37.2549019607843, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17543100, Length=306, Percent_Identity=37.2549019607843, Blast_Score=187, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17543104, Length=274, Percent_Identity=37.2262773722628, Blast_Score=184, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6325154, Length=254, Percent_Identity=36.6141732283465, Blast_Score=157, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37388; Mature: 37388
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVISINNFTKNKFSNPPGSPMRKGGSRDFLKFIFSSMFKKHKKVFPRDHVLEKQQALE CEEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QLNNASNYSITWLGHAAFLIKLNEYFIITDPFLSKNAGPGFLGPKREIYSPLNLSDIPKI HHCCCCCEEEEEEEEEEEEEEECCEEEEECCHHCCCCCCCCCCCHHHHCCCCCCCCCCCE DMIIISHNHYDHLDSKLIKNFPNKENIKVIVPIGLSSFFIKRGFKNVTEMGWWQQIDIND EEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEECCCC ITIGCLPCVHFSGRGLFDRNKTLWASFSIKDKNKKVWFSGDTAYGEIFKEIGKKEEYFDL EEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCCCEEEE ALIGIGAYEPRDFMCSVHATPEEAIQIAKDIKATKTIGMHWGTIRLTPEPFFEPPKRFKQ EEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEECEECEEEEECCCCCCCCHHHHHH AAKDQKYGQENALILKIGETINLENY HHHHHHCCCCCEEEEEECCEECCCCC >Mature Secondary Structure MVKVISINNFTKNKFSNPPGSPMRKGGSRDFLKFIFSSMFKKHKKVFPRDHVLEKQQALE CEEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QLNNASNYSITWLGHAAFLIKLNEYFIITDPFLSKNAGPGFLGPKREIYSPLNLSDIPKI HHCCCCCEEEEEEEEEEEEEEECCEEEEECCHHCCCCCCCCCCCHHHHCCCCCCCCCCCE DMIIISHNHYDHLDSKLIKNFPNKENIKVIVPIGLSSFFIKRGFKNVTEMGWWQQIDIND EEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEECCCC ITIGCLPCVHFSGRGLFDRNKTLWASFSIKDKNKKVWFSGDTAYGEIFKEIGKKEEYFDL EEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCCCEEEE ALIGIGAYEPRDFMCSVHATPEEAIQIAKDIKATKTIGMHWGTIRLTPEPFFEPPKRFKQ EEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEECEECEEEEECCCCCCCCHHHHHH AAKDQKYGQENALILKIGETINLENY HHHHHHCCCCCEEEEEECCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]