| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is purH [H]
Identifier: 134302692
GI number: 134302692
Start: 1768885
End: 1770432
Strand: Direct
Name: purH [H]
Synonym: FTW_1885
Alternate gene names: 134302692
Gene position: 1768885-1770432 (Clockwise)
Preceding gene: 134302689
Following gene: 134302695
Centisome position: 93.17
GC content: 36.63
Gene sequence:
>1548_bases ATGTCAAAAATAAAAAGGGTACTAATATCTGTATCTGATAAAACAGGTATCATTGAATTTGCCAAAGAATTAAGTAAGTA TAACATCGAAATACTTTCAACAGGTGGAACTTCAAAAACCCTTAAAGATGCTGGAATAAACGTAATAGATGTTTCAGAGC ATACACAATTTCCAGAAATTATGAATGGTCGTGTAAAAACACTTCATCCACTAATTCATGGTGGTATCTTAGCCGATAGA GATAATCCTGAGCATCTCGATGCGATGCTAAAAAATCATATTGGACAAATAGATATGGTAGTCGTTAACTTATACCCTTT TGTCAATACAGTTAAATCCGGTGCTGATTTTGATACCTGTATCGAAAACATAGATATCGGCGGACCTTCTATGGTGAGAT CATGTGCAAAAAATCATAAACACACAACTATAGTGACCAACCCTAGTCAATATGATCTAGTTATCAAAGAGATGGCTGAG AATGATGGCAAAACTACTCTAGCAACACGTCGTGAATTTGCTAAAGAAGCGTTTGCACATACTGCCGAATATGATAGTCA TATTGCAAACTGGTTTAGTAAAGAGCTAGATGAAGAGTATCCTGAGAAACTTTTTTCTGTAGGAACTCTAAAACAGGTTT TAAGATATGGCGAAAATCCTCATCAAAAAGCAGCTGTATACTCTACAGATGCTGACTGTGTAAGCATTACAAATGCAAGA CAATTACAAGGCAAAGAATTATCGTATAATAACCTAAATGATGCCGATGGTGCTTTTGAGATGGTTTGTGAGTATTCAGA ACCCTCTTGTGCAATTATCAAACATGCTAATCCTTGTGGTATCGCTTCTGGTAAAAATGCTTTTGAAGCTTGGACAAAAG CTCTAGCTTGTGATCCAATTTCAGCTTTTGGTGGAATTGTTGCGTTTAACTGTGAAGTTGACAAAGAGTTTGCTGAATCT CTAGGTAAAATGTTTTTAGAAGTAATAATTGCACCAAGCTATACTCAAGAAGCTCTAGATATTTTAGCAGCTAAGAAAAA CTTACGCGTATTAGAAACTGGTAAAGTTTTTGATACAAAATCATCACGTATGATAAGTAAAAATATTCATGGTGGAATAC TATCTCAATCTTATGATAACGGTGGCGTTGACATTAATGACTGTAAAGTTGTTACAGATAGAGCGCCAACTGACAAAGAG TGGGCTGATTTAATGTTTGCCTGGAAAGCTGTTAAATACGTCAAATCAAATGCAATTGTCTATGCTAGAGATACCCAAAC AGTAGGAATTGGTGCTGGACAGATGAGTCGAGTTGATTCTGCACGTATTGGTGCTGAAAAAGCCCAAGCTCATCAAGGTG CTAAAGGTTCTGCTGTCGCATCTGATGCTTTCTTCCCTTTTGCTGACGGTTTAGAAGAATGTATCAAAGCTGGAGCAACA GCGGTAATTCAACCAGGCGGTTCAAAAAATGATCAAGAAGTTATTGATGCTGCTAACAAAGCTGGTATCACTATGGTCTT CACAAATATGAGACATTTTAGACACTAA
Upstream 100 bases:
>100_bases ATATCGTTTAACAAAAATGTTTTAACTAAGAATTTATGATTAAAATTGTTATAATGATAGTTAAAATCTGACTTTAAATA AATAATAACAAGGAACAAGC
Downstream 100 bases:
>100_bases ATTAATAAATCTTTCTCCAAGTTGGATAATGTTATTTATTGTATTTTAATTGCTAGAACATTCTTTTAAGATAACGCCGA AGTTAAAAGCGGCGATATTA
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MSKIKRVLISVSDKTGIIEFAKELSKYNIEILSTGGTSKTLKDAGINVIDVSEHTQFPEIMNGRVKTLHPLIHGGILADR DNPEHLDAMLKNHIGQIDMVVVNLYPFVNTVKSGADFDTCIENIDIGGPSMVRSCAKNHKHTTIVTNPSQYDLVIKEMAE NDGKTTLATRREFAKEAFAHTAEYDSHIANWFSKELDEEYPEKLFSVGTLKQVLRYGENPHQKAAVYSTDADCVSITNAR QLQGKELSYNNLNDADGAFEMVCEYSEPSCAIIKHANPCGIASGKNAFEAWTKALACDPISAFGGIVAFNCEVDKEFAES LGKMFLEVIIAPSYTQEALDILAAKKNLRVLETGKVFDTKSSRMISKNIHGGILSQSYDNGGVDINDCKVVTDRAPTDKE WADLMFAWKAVKYVKSNAIVYARDTQTVGIGAGQMSRVDSARIGAEKAQAHQGAKGSAVASDAFFPFADGLEECIKAGAT AVIQPGGSKNDQEVIDAANKAGITMVFTNMRHFRH
Sequences:
>Translated_515_residues MSKIKRVLISVSDKTGIIEFAKELSKYNIEILSTGGTSKTLKDAGINVIDVSEHTQFPEIMNGRVKTLHPLIHGGILADR DNPEHLDAMLKNHIGQIDMVVVNLYPFVNTVKSGADFDTCIENIDIGGPSMVRSCAKNHKHTTIVTNPSQYDLVIKEMAE NDGKTTLATRREFAKEAFAHTAEYDSHIANWFSKELDEEYPEKLFSVGTLKQVLRYGENPHQKAAVYSTDADCVSITNAR QLQGKELSYNNLNDADGAFEMVCEYSEPSCAIIKHANPCGIASGKNAFEAWTKALACDPISAFGGIVAFNCEVDKEFAES LGKMFLEVIIAPSYTQEALDILAAKKNLRVLETGKVFDTKSSRMISKNIHGGILSQSYDNGGVDINDCKVVTDRAPTDKE WADLMFAWKAVKYVKSNAIVYARDTQTVGIGAGQMSRVDSARIGAEKAQAHQGAKGSAVASDAFFPFADGLEECIKAGAT AVIQPGGSKNDQEVIDAANKAGITMVFTNMRHFRH >Mature_514_residues SKIKRVLISVSDKTGIIEFAKELSKYNIEILSTGGTSKTLKDAGINVIDVSEHTQFPEIMNGRVKTLHPLIHGGILADRD NPEHLDAMLKNHIGQIDMVVVNLYPFVNTVKSGADFDTCIENIDIGGPSMVRSCAKNHKHTTIVTNPSQYDLVIKEMAEN DGKTTLATRREFAKEAFAHTAEYDSHIANWFSKELDEEYPEKLFSVGTLKQVLRYGENPHQKAAVYSTDADCVSITNARQ LQGKELSYNNLNDADGAFEMVCEYSEPSCAIIKHANPCGIASGKNAFEAWTKALACDPISAFGGIVAFNCEVDKEFAESL GKMFLEVIIAPSYTQEALDILAAKKNLRVLETGKVFDTKSSRMISKNIHGGILSQSYDNGGVDINDCKVVTDRAPTDKEW ADLMFAWKAVKYVKSNAIVYARDTQTVGIGAGQMSRVDSARIGAEKAQAHQGAKGSAVASDAFFPFADGLEECIKAGATA VIQPGGSKNDQEVIDAANKAGITMVFTNMRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=478, Percent_Identity=38.2845188284519, Blast_Score=286, Evalue=4e-77, Organism=Escherichia coli, GI1790439, Length=529, Percent_Identity=52.5519848771267, Blast_Score=528, Evalue=1e-151, Organism=Caenorhabditis elegans, GI71985564, Length=602, Percent_Identity=30.5647840531561, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71985574, Length=343, Percent_Identity=27.1137026239067, Blast_Score=90, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323056, Length=473, Percent_Identity=35.5179704016913, Blast_Score=259, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6323768, Length=473, Percent_Identity=35.3065539112051, Blast_Score=256, Evalue=5e-69, Organism=Drosophila melanogaster, GI24649832, Length=477, Percent_Identity=36.8972746331237, Blast_Score=262, Evalue=4e-70,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56220; Mature: 56089
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIKRVLISVSDKTGIIEFAKELSKYNIEILSTGGTSKTLKDAGINVIDVSEHTQFPEI CCHHHEEHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCEEECCCCCCCHHH MNGRVKTLHPLIHGGILADRDNPEHLDAMLKNHIGQIDMVVVNLYPFVNTVKSGADFDTC HCCCHHHHHHHHHCCEEECCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCCHHHH IENIDIGGPSMVRSCAKNHKHTTIVTNPSQYDLVIKEMAENDGKTTLATRREFAKEAFAH HHHCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TAEYDSHIANWFSKELDEEYPEKLFSVGTLKQVLRYGENPHQKAAVYSTDADCVSITNAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCHH QLQGKELSYNNLNDADGAFEMVCEYSEPSCAIIKHANPCGIASGKNAFEAWTKALACDPI HCCCCCCCCCCCCCCCCHHHHHEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCH SAFGGIVAFNCEVDKEFAESLGKMFLEVIIAPSYTQEALDILAAKKNLRVLETGKVFDTK HHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCEECCC SSRMISKNIHGGILSQSYDNGGVDINDCKVVTDRAPTDKEWADLMFAWKAVKYVKSNAIV CCHHHHHCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEE YARDTQTVGIGAGQMSRVDSARIGAEKAQAHQGAKGSAVASDAFFPFADGLEECIKAGAT EEECCCEEECCCCHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCE AVIQPGGSKNDQEVIDAANKAGITMVFTNMRHFRH EEECCCCCCCHHHHHHHHCCCCEEEEEECHHHHCC >Mature Secondary Structure SKIKRVLISVSDKTGIIEFAKELSKYNIEILSTGGTSKTLKDAGINVIDVSEHTQFPEI CHHHEEHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCEEECCCCCCCHHH MNGRVKTLHPLIHGGILADRDNPEHLDAMLKNHIGQIDMVVVNLYPFVNTVKSGADFDTC HCCCHHHHHHHHHCCEEECCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCCHHHH IENIDIGGPSMVRSCAKNHKHTTIVTNPSQYDLVIKEMAENDGKTTLATRREFAKEAFAH HHHCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TAEYDSHIANWFSKELDEEYPEKLFSVGTLKQVLRYGENPHQKAAVYSTDADCVSITNAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCHH QLQGKELSYNNLNDADGAFEMVCEYSEPSCAIIKHANPCGIASGKNAFEAWTKALACDPI HCCCCCCCCCCCCCCCCHHHHHEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCH SAFGGIVAFNCEVDKEFAESLGKMFLEVIIAPSYTQEALDILAAKKNLRVLETGKVFDTK HHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCEECCC SSRMISKNIHGGILSQSYDNGGVDINDCKVVTDRAPTDKEWADLMFAWKAVKYVKSNAIV CCHHHHHCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEE YARDTQTVGIGAGQMSRVDSARIGAEKAQAHQGAKGSAVASDAFFPFADGLEECIKAGAT EEECCCEEECCCCHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCE AVIQPGGSKNDQEVIDAANKAGITMVFTNMRHFRH EEECCCCCCCHHHHHHHHCCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA