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The map label for this gene is ysgA [C]

Identifier: 134302689

GI number: 134302689

Start: 1766150

End: 1766866

Strand: Direct

Name: ysgA [C]

Synonym: FTW_1882

Alternate gene names: 134302689

Gene position: 1766150-1766866 (Clockwise)

Preceding gene: 134302688

Following gene: 134302692

Centisome position: 93.03

GC content: 35.01

Gene sequence:

>717_bases
ATGATAATTACAAAAGAAATTGAATATCGTGGTGATGGTGTCTTACTAAAAGGCTTTTGTGCATATCCAGATAGAGGTGC
ACATTTACCGGCAGTGCTAATAGCACCAACATGGGCAGGTAGGGATGATTTTGCATGTGATAAAGCGATAGCGATGGCAA
AAAAAGGTTATATTGGCTTTGCTATAGATATCTATGGTGATGCAAAAGTAGGTACTAAACAAGAAAATGCTAGCTTGATG
AATAATCTCTTAGCTGAAAAATACGCCTTAATGACTAGACTTAGAACAGCGTATAGCACAGTAAAAAGAATGCCAAAAGT
TGATAAGGCAAATATCGCTGCAATAGGTTTCTGCTTTGGTGGTAAATGTGTTTTAGATATGGCTAGATCAAATTTTGAGC
TTAAAGCGGCGATCAGCTTTCATGGTTTACTAGAATCTAATATTGTCAAAGAGCAAAATATAGATACTAAAATACTAGTA
TTACATGGCTATAATGATCCAATGGTACCACCAGAGCAAGTCAATAAATTTCAGCAAGAGATGGATATGCGTAAAGCAGA
TTGGCAACTACATACTTTTGGCAATACTTATCATGCTTTCACAAATCCTAATGCCAATGATCATGAGTTTGGCACGGTAT
TTAATAAACTTTCAAACAAAAGAGCTTGGAAACTAGCTGAAGATTTTCTTAGAGAAACTTTTATAAGTAGTTATTAA

Upstream 100 bases:

>100_bases
TAATTTTTACTAATCTACAATTATTTGACTATACCAAAACTAGCTTTATATTTATAATTAGGCTAATTCTATAAATTTTA
AGCTAATCTAGAGAAGTAAA

Downstream 100 bases:

>100_bases
TGAAGAATTGATAAAAAATTATTTTATAAGACCAATATATGGAAGTTCACGGTATTTCTCATCGAAATCTAAGCCATAGC
CAACAATAAATTTATCTTCT

Product: dienelactone hydrolase family protein

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIITKEIEYRGDGVLLKGFCAYPDRGAHLPAVLIAPTWAGRDDFACDKAIAMAKKGYIGFAIDIYGDAKVGTKQENASLM
NNLLAEKYALMTRLRTAYSTVKRMPKVDKANIAAIGFCFGGKCVLDMARSNFELKAAISFHGLLESNIVKEQNIDTKILV
LHGYNDPMVPPEQVNKFQQEMDMRKADWQLHTFGNTYHAFTNPNANDHEFGTVFNKLSNKRAWKLAEDFLRETFISSY

Sequences:

>Translated_238_residues
MIITKEIEYRGDGVLLKGFCAYPDRGAHLPAVLIAPTWAGRDDFACDKAIAMAKKGYIGFAIDIYGDAKVGTKQENASLM
NNLLAEKYALMTRLRTAYSTVKRMPKVDKANIAAIGFCFGGKCVLDMARSNFELKAAISFHGLLESNIVKEQNIDTKILV
LHGYNDPMVPPEQVNKFQQEMDMRKADWQLHTFGNTYHAFTNPNANDHEFGTVFNKLSNKRAWKLAEDFLRETFISSY
>Mature_238_residues
MIITKEIEYRGDGVLLKGFCAYPDRGAHLPAVLIAPTWAGRDDFACDKAIAMAKKGYIGFAIDIYGDAKVGTKQENASLM
NNLLAEKYALMTRLRTAYSTVKRMPKVDKANIAAIGFCFGGKCVLDMARSNFELKAAISFHGLLESNIVKEQNIDTKILV
LHGYNDPMVPPEQVNKFQQEMDMRKADWQLHTFGNTYHAFTNPNANDHEFGTVFNKLSNKRAWKLAEDFLRETFISSY

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536419, Length=242, Percent_Identity=37.1900826446281, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17532655, Length=241, Percent_Identity=35.6846473029046, Blast_Score=140, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17532653, Length=244, Percent_Identity=35.2459016393443, Blast_Score=122, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17536415, Length=241, Percent_Identity=33.6099585062241, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI193204305, Length=210, Percent_Identity=33.8095238095238, Blast_Score=114, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17534829, Length=149, Percent_Identity=38.9261744966443, Blast_Score=98, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 26789; Mature: 26789

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITKEIEYRGDGVLLKGFCAYPDRGAHLPAVLIAPTWAGRDDFACDKAIAMAKKGYIGF
CEEECEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEE
AIDIYGDAKVGTKQENASLMNNLLAEKYALMTRLRTAYSTVKRMPKVDKANIAAIGFCFG
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
GKCVLDMARSNFELKAAISFHGLLESNIVKEQNIDTKILVLHGYNDPMVPPEQVNKFQQE
CHHHEEHHHCCCEEEEEEEHHHHHHHHCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHH
MDMRKADWQLHTFGNTYHAFTNPNANDHEFGTVFNKLSNKRAWKLAEDFLRETFISSY
HHHHHHCEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIITKEIEYRGDGVLLKGFCAYPDRGAHLPAVLIAPTWAGRDDFACDKAIAMAKKGYIGF
CEEECEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEE
AIDIYGDAKVGTKQENASLMNNLLAEKYALMTRLRTAYSTVKRMPKVDKANIAAIGFCFG
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
GKCVLDMARSNFELKAAISFHGLLESNIVKEQNIDTKILVLHGYNDPMVPPEQVNKFQQE
CHHHEEHHHCCCEEEEEEEHHHHHHHHCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHH
MDMRKADWQLHTFGNTYHAFTNPNANDHEFGTVFNKLSNKRAWKLAEDFLRETFISSY
HHHHHHCEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]