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The map label for this gene is ppdD [C]

Identifier: 134302220

GI number: 134302220

Start: 1222940

End: 1223380

Strand: Direct

Name: ppdD [C]

Synonym: FTW_1290

Alternate gene names: 134302220

Gene position: 1222940-1223380 (Clockwise)

Preceding gene: 134302219

Following gene: 134302223

Centisome position: 64.42

GC content: 37.41

Gene sequence:

>441_bases
ATGCAAACACACAAACAAACAGGTTTCTCACTAGTTGAGCTAATGGTAGTAATTGCAATAATTGCAATCTTAGCAGCTGT
AGCAATACCGATTTACTCAAACTACAAAGAGCGTGCTGCAATTATCGAATCTATGAACATAATTGGTAATGTCAAAGCTA
GTATCCAAAATGATATCAATAATAATCTAGATATCTCACAGCAAACTTATGACACCCCTACTGGAGTCACTGTAACAGGT
AGTACGTCAGGAGCTACTATTGATATAAACCTAAGCCAAACTTCACCACAACACTTTACCAACGATAATGATATTATCAG
ACTTAGTGGTGTAGTTGTTAGTGGTAGCACTTTCCAATGGACTTGCTCACATAATGTCAACGCCTCAACATTAACAGCTA
GTAATGTCCCACACACTTGCTCAAGTACTTTTAGTGCTTAG

Upstream 100 bases:

>100_bases
CTTTCATGTGGCTTTTTTATATCCAAAATTTTATCTTAATTTCTTTTTTGACTTTTTTTAGCTATAATTTTTAAAACTAT
TTTTAAAAGTTATACAAATT

Downstream 100 bases:

>100_bases
GATTTAAAGTACTACCCCGACCTGCTTCGCAATCTATCCAAAACCACCTCCCCTTGCAAGCAAGGTATTTCTCCAAAGGA
GGAGAATAATAACTTATATT

Product: type IV pili fiber building block protein

Products: NA

Alternate protein names: Type IV Pili Associated Protein; Type IV Pili Pilus Assembly Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MQTHKQTGFSLVELMVVIAIIAILAAVAIPIYSNYKERAAIIESMNIIGNVKASIQNDINNNLDISQQTYDTPTGVTVTG
STSGATIDINLSQTSPQHFTNDNDIIRLSGVVVSGSTFQWTCSHNVNASTLTASNVPHTCSSTFSA

Sequences:

>Translated_146_residues
MQTHKQTGFSLVELMVVIAIIAILAAVAIPIYSNYKERAAIIESMNIIGNVKASIQNDINNNLDISQQTYDTPTGVTVTG
STSGATIDINLSQTSPQHFTNDNDIIRLSGVVVSGSTFQWTCSHNVNASTLTASNVPHTCSSTFSA
>Mature_146_residues
MQTHKQTGFSLVELMVVIAIIAILAAVAIPIYSNYKERAAIIESMNIIGNVKASIQNDINNNLDISQQTYDTPTGVTVTG
STSGATIDINLSQTSPQHFTNDNDIIRLSGVVVSGSTFQWTCSHNVNASTLTASNVPHTCSSTFSA

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15547; Mature: 15547

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTHKQTGFSLVELMVVIAIIAILAAVAIPIYSNYKERAAIIESMNIIGNVKASIQNDIN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NNLDISQQTYDTPTGVTVTGSTSGATIDINLSQTSPQHFTNDNDIIRLSGVVVSGSTFQW
CCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCEEEE
TCSHNVNASTLTASNVPHTCSSTFSA
EECCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MQTHKQTGFSLVELMVVIAIIAILAAVAIPIYSNYKERAAIIESMNIIGNVKASIQNDIN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NNLDISQQTYDTPTGVTVTGSTSGATIDINLSQTSPQHFTNDNDIIRLSGVVVSGSTFQW
CCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCEEEE
TCSHNVNASTLTASNVPHTCSSTFSA
EECCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA