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The map label for this gene is dtpB [H]

Identifier: 134301731

GI number: 134301731

Start: 670685

End: 672172

Strand: Reverse

Name: dtpB [H]

Synonym: FTW_0691

Alternate gene names: 134301731

Gene position: 672172-670685 (Counterclockwise)

Preceding gene: 134301732

Following gene: 134301730

Centisome position: 35.41

GC content: 33.53

Gene sequence:

>1488_bases
ATGCCTATGCAAAAAAATTATAATACTCTATCCGCACCTTTCTGGATTGTCTGGGGTATAGAGTTATGGGAAAGGTTTGG
ATTTTATGGCTTTCAAGCAATTATCGCGCTGTATTTTACACAGAAACTTGGGCTAAGTGAAAGAGAAACTATTTATCTGA
TGGGGTCTTTTTTTGCTTTTACATATGGATTTATATGGGTTGGTGGACTCATAGGTGACAAAGTTCTTGGCGCTAAACGT
ACAATTTTATTTGGTGCGGTAATACTGTGTTTATCTTACTTAAGCTTTATCTTTGCAGATAAACAAAACGTTTATTATAT
TTTTTCAGGAATTATTATTGGTAATGCCATATTTAAAGCAAACCCTTCTTCTTTAATTTCAAAGATGTTTGATAAAGGCG
ATGGCCGCTTAAATAGTGCTATGACTTTATATTACCTTGCAATTAATATGGGTGGGCTAATCTGTATGGCTTTGACACCT
GTGATATCACAAATTTATGGATATACTCATGCTTTTATACTTTGTGGGATTGGTCTATTTGTTGGTATATTAGGATTTAT
ATTGTTTTATAAAAAGCTAGAGGGTCTAGACACAGAAGCGGGTAAACATCCTATCAATAAAACTCATCTAACATATATCA
TTGCAGGAGTTATCGCAGCATTTTTAATAGTTGCAAATATTCTTCCTAATACGACCCTATGTATAGAACTAACTGCTGTT
GTTGTAACTATAGCTACACTATATTTCTTATATGTAGCTTTTAGCCTTGAGTCATATGAAAGAAATAGAATGCTTGTAGC
TCTTGTACTTATCATTGAAGCGATAATCTTCTACTCTTTATATTTTCAAATGCCAACTACACTAACTTTCTTTGCTCAGC
ACAATGTTGAACTTTCTGTATTTGGTTGGCATGTCCCTGCTGCACAATATCAATTTTTAAATCCTCTATGGATTTTGATA
TTATCACCTATTCTTGCAGCAGTATACAAAAAAAGTAAATTAACACACGCTACTAAGTTTTGTATTGGAACAGCGTTAAT
GTTTATATCATACGCAACTTTATACTCTACTAGATATTTCGCAACTAATGCTGTAGTTTCAGGTAACTGGCTAATTCTAT
CATACGCAACCTCTTCTTTAGGTGAGCTACTTATATCAGGCTTAGGGCTAGCAATGGTTGCTGAACTATGCCCAGCTTTC
ATATCTGGATTTGTGATGGGATTTTGGTTTCTAGCTACGATGATTGCATCTTATGTTGCTTCTTACATAGGATCATTTAT
AGCGCTACCTCAAAGTGGTGATACTATCTCTAAACAACAAAGCTTAGACACCTATACAGCAGTATTTGGTTATGTCGCTA
TTGGTATTTTAGTTACTACAATAATTATGGTTATTTTGACTCCTATACTAAATAAATACATAAACAGAATACGGGTTATT
GATGATCATAAAGCAGATATTGACAATATTACATATCCTCAAAACTAA

Upstream 100 bases:

>100_bases
TGCTAAATTAAATCAATAACCTTTTACTGTAAATAATTATTGCAAAAGTTTGTACTCGATGTTTTAATGGGTTTTTTAGT
ATAATTAATATTAGGAGAAA

Downstream 100 bases:

>100_bases
AAAATCTTAATTTAACACCTTCTAATAAAGAAATAATCTTGCAAATTTATTTCAATACTTTGTTTTTTTGCTAGAATTAG
TTCTAGTAATTAACAATCTT

Product: amino acid/peptide transporter (peptide:H+ symporter)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MPMQKNYNTLSAPFWIVWGIELWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAFTYGFIWVGGLIGDKVLGAKR
TILFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKANPSSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTP
VISQIYGYTHAFILCGIGLFVGILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAV
VVTIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSVFGWHVPAAQYQFLNPLWILI
LSPILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYFATNAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAF
ISGFVMGFWFLATMIASYVASYIGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVI
DDHKADIDNITYPQN

Sequences:

>Translated_495_residues
MPMQKNYNTLSAPFWIVWGIELWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAFTYGFIWVGGLIGDKVLGAKR
TILFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKANPSSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTP
VISQIYGYTHAFILCGIGLFVGILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAV
VVTIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSVFGWHVPAAQYQFLNPLWILI
LSPILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYFATNAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAF
ISGFVMGFWFLATMIASYVASYIGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVI
DDHKADIDNITYPQN
>Mature_494_residues
PMQKNYNTLSAPFWIVWGIELWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAFTYGFIWVGGLIGDKVLGAKRT
ILFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKANPSSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTPV
ISQIYGYTHAFILCGIGLFVGILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAVV
VTIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSVFGWHVPAAQYQFLNPLWILIL
SPILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYFATNAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAFI
SGFVMGFWFLATMIASYVASYIGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVID
DHKADIDNITYPQN

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787922, Length=472, Percent_Identity=40.6779661016949, Blast_Score=343, Evalue=1e-95,
Organism=Escherichia coli, GI1789911, Length=472, Percent_Identity=37.0762711864407, Blast_Score=323, Evalue=2e-89,
Organism=Escherichia coli, GI1790572, Length=465, Percent_Identity=25.1612903225806, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI1786927, Length=499, Percent_Identity=23.0460921843687, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 55123; Mature: 54992

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMQKNYNTLSAPFWIVWGIELWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAF
CCCCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHH
TYGFIWVGGLIGDKVLGAKRTILFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCHHHCC
NPSSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTPVISQIYGYTHAFILCGIGLF
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAV
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VVTIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEE
FGWHVPAAQYQFLNPLWILILSPILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYF
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATNAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAFISGFVMGFWFLATMIASYVA
HCCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYIGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVI
HHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DDHKADIDNITYPQN
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
PMQKNYNTLSAPFWIVWGIELWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAF
CCCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHH
TYGFIWVGGLIGDKVLGAKRTILFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCHHHCC
NPSSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTPVISQIYGYTHAFILCGIGLF
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAV
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VVTIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEE
FGWHVPAAQYQFLNPLWILILSPILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYF
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATNAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAFISGFVMGFWFLATMIASYVA
HCCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYIGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVI
HHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DDHKADIDNITYPQN
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA