Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134300213

Identifier: 134300213

GI number: 134300213

Start: 2598888

End: 2599730

Strand: Reverse

Name: 134300213

Synonym: Dred_2374

Alternate gene names: NA

Gene position: 2599730-2598888 (Counterclockwise)

Preceding gene: 134300214

Following gene: 134300212

Centisome position: 72.05

GC content: 41.76

Gene sequence:

>843_bases
ATGCAGCTTACTGTATTAGTGGATAACAATACGATTATTGATCGGTATTTGATTGGAGAGCCAGGTTTGTCGTTCTTTTT
GGAAACCGGGGGAAAGCGAATCCTGTTTGATACTGGTTATTCAGATGCATTTATACAAAACGCAGGAAAGATAGGGATCA
ATCTTCGGGTATTAGACTACGTTGTACTCTCCCACGGGCATATGGATCATACTTGGGGCTTAGATCCCCTTATACGGCTT
TATACAGAAGCCATCATAGAAAACCAAGCGGGGATGTTAAAACCTGTGGTTGTGGGACATTCTGATGTTTTCTATAGCAA
ACGATTAAAGGGAATGGGGGAAATAGGGAGTACTGTGGCAAAGAGCAAACTCTCCCAACACTTTGAACTCAAGCTGTTGA
AAAATCCCCTTTGGCTTACTGAAAAACTAGTTTTCCTAGGTGAAATACCAAGGACCTATGAGTTTGAAGCTAAGACCCCC
CTAGGTACTGTCCTAAAAAAATCCCATGAAGAAGAGGATTTTCTGTTGGATGATACAGCCCTGGCGTATAAAGCAAAGGA
CGGGTTAGTCATTATAGTTGGTTGTTCCCACTCAGGTATTTGTAATATTGTTGAGTATGCTAAGAAGGTTTGCCAGGATG
AGCGGGTGCTAGACATTATTGGAGGATTTCATTTGCTAAGTCCACCCCGGAGTCAGATGGACGGTGTTAAGGATTATCTC
AGGACATTACAACCAAAGGAAGTACATGCCTGTCATTGTACGGATCTTCAAGCCAAGATAGAGTTGTCAGAGGTTGTTAA
TTTAAAAGAGGTAGGGGTAGGGTTAAAATTACAGTATGATTGA

Upstream 100 bases:

>100_bases
TCTGGACAATACCAGGAGGCTTTTTAGTATATCAAAAGAATAAATTTTTCTGATATGATAAAGGCAAACTAAGAGGGATT
AAACCACAAAGGAGAAAACC

Downstream 100 bases:

>100_bases
GTTTGTAACTGTAAAATCTCCGAAAGAAAAATCCAGATTAGTTTGAGCCCTTCAGAATTTTGTAGAAAGTCCGAAAGAAG
TATTAAGAACCAGCATATCT

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDYVVLSHGHMDHTWGLDPLIRL
YTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVAKSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTP
LGTVLKKSHEEEDFLLDDTALAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL
RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD

Sequences:

>Translated_280_residues
MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDYVVLSHGHMDHTWGLDPLIRL
YTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVAKSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTP
LGTVLKKSHEEEDFLLDDTALAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL
RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD
>Mature_280_residues
MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDYVVLSHGHMDHTWGLDPLIRL
YTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVAKSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTP
LGTVLKKSHEEEDFLLDDTALAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL
RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD

Specific function: Unknown

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 31315; Mature: 31315

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDY
CEEEEEECCCEEEEEEEECCCCCEEHEECCCCEEEEECCCCHHHHHCCCCCEEEEEHHHH
VVLSHGHMDHTWGLDPLIRLYTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVA
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHH
KSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTPLGTVLKKSHEEEDFLLDDTA
HHHHHHHHEEHHHCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCEEECCCC
LAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL
EEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD
HHCCCCCEEEEEECCCHHEEEHHHHCCHHHHCCCEEEECC
>Mature Secondary Structure
MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDY
CEEEEEECCCEEEEEEEECCCCCEEHEECCCCEEEEECCCCHHHHHCCCCCEEEEEHHHH
VVLSHGHMDHTWGLDPLIRLYTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVA
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHH
KSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTPLGTVLKKSHEEEDFLLDDTA
HHHHHHHHEEHHHCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCEEECCCC
LAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL
EEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD
HHCCCCCEEEEEECCCHHEEEHHHHCCHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]