| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134300184
Identifier: 134300184
GI number: 134300184
Start: 2563652
End: 2564824
Strand: Reverse
Name: 134300184
Synonym: Dred_2345
Alternate gene names: NA
Gene position: 2564824-2563652 (Counterclockwise)
Preceding gene: 134300185
Following gene: 134300183
Centisome position: 71.09
GC content: 42.71
Gene sequence:
>1173_bases TTGAAAAAGCTTAATGTAATACTTCTTATGATTTTGGCATTTTTTACTGTGATTTTCCAGGCTGAGGCAGCTGGGCGGCT TTATCCCTATGGAGAAGTAAAATGGATGGTGGAGAAAGCCGGTAAATTATCGGCGGATGTTACTATAACCGATAATGGTC TCCTGTATTGTCCGGCGGGTAATAAAATCATCTGTTATGATTTAAGCAAAGGTACTAAGCTTTGGGAAAGAAAAATGGAT ATGGGGGGCAAGATCACGCAACCACTGTTGGTACAAAATCAGATCATTTATGCCACTGGAACCGAAGGAATTCAACAAAT GAGACCCAATGGCAGTGTAACCTGGCTTTACCGTCTGCTACCCAAAGCCAAAGGAAGCAAAAGCAGCGCAGCGGTTTCTG CAGGGCCTAATAATTTAATCTATCTGGGGGTTGCTGACGGACTCTATGCCCTGGAACCACTAAAAAGTCATAAGTGGCGC TATTCCGATGAAAAAAATATTCTTGCTTTGCAGGGGAACGAACAGGCAGTTTATGTTTGTCTGGGAGACAAAGACAAAGG TTATAGCCTACAGGCCATTGATAAACAGGGGGCAAAACTTTGGCAGGAGAGTCTTGGAACCATCAAGAATATTCACATGA CCTTTGGATCGGAGGGTAATCTCATTGTTGTAACCAATCCTGCCGCCCTGGATCGAAATACATCGGCTAAAATCCGCTGT TATGATCCGAAAAAAGGACGAGAGGAATGGTCCTATTCAGTTAAAACTCAAGATATAACAGATATTTCCTTTTCCAATGA CAATACCATCTTTTTTTGTGGCAATAGCAGGCTATATTGTCTTAATGGGGATAACGGTCAATTAAAATGGGATATTCCCC TACTGAATGTTGCTTCCGGAGTGGCTGTTGATCCCTCCAAAAAGCGTATTTATGCAGGAAGCACAGATGGCAGAATTTTT TGTGTTAGTTTTGCCGGTCGCTTGCTTTGGGACAAAGAGATTGATAAAACTACCGGTCAGACCTTAGCCAAGGGAGGTGG CATTATGGTTGACACCGGGAAGGATGAAAAGGATACCATTACCAGGGCACCTATTTTATTGAAGGACGGCAGTATCCTTA TTTATACGGACAAGGGTACTATGTATCGGTTTGTGGATGTATTTAAGGGGTGA
Upstream 100 bases:
>100_bases TTAAGGCCGAAAAGTAAGATATAGGAATAAAAAGAATCCTTTTTAGAAGGAAGTGCCCCTGCGGTACAAGAAGAAAAATA TGCAATGGGGGTTTGATCAT
Downstream 100 bases:
>100_bases GGATAATAAGAATTCTAATGAAAAGTATGCGCACATTTCTTTTCTTGCTACTATGTCTTTTGCAGCCCGTCACAGTTTGG GCTCTGGGAGTGCAGTCCTC
Product: Pyrrolo-quinoline quinone
Products: NA
Alternate protein names: Cell Surface Protein
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKKLNVILLMILAFFTVIFQAEAAGRLYPYGEVKWMVEKAGKLSADVTITDNGLLYCPAGNKIICYDLSKGTKLWERKMD MGGKITQPLLVQNQIIYATGTEGIQQMRPNGSVTWLYRLLPKAKGSKSSAAVSAGPNNLIYLGVADGLYALEPLKSHKWR YSDEKNILALQGNEQAVYVCLGDKDKGYSLQAIDKQGAKLWQESLGTIKNIHMTFGSEGNLIVVTNPAALDRNTSAKIRC YDPKKGREEWSYSVKTQDITDISFSNDNTIFFCGNSRLYCLNGDNGQLKWDIPLLNVASGVAVDPSKKRIYAGSTDGRIF CVSFAGRLLWDKEIDKTTGQTLAKGGGIMVDTGKDEKDTITRAPILLKDGSILIYTDKGTMYRFVDVFKG
Sequences:
>Translated_390_residues MKKLNVILLMILAFFTVIFQAEAAGRLYPYGEVKWMVEKAGKLSADVTITDNGLLYCPAGNKIICYDLSKGTKLWERKMD MGGKITQPLLVQNQIIYATGTEGIQQMRPNGSVTWLYRLLPKAKGSKSSAAVSAGPNNLIYLGVADGLYALEPLKSHKWR YSDEKNILALQGNEQAVYVCLGDKDKGYSLQAIDKQGAKLWQESLGTIKNIHMTFGSEGNLIVVTNPAALDRNTSAKIRC YDPKKGREEWSYSVKTQDITDISFSNDNTIFFCGNSRLYCLNGDNGQLKWDIPLLNVASGVAVDPSKKRIYAGSTDGRIF CVSFAGRLLWDKEIDKTTGQTLAKGGGIMVDTGKDEKDTITRAPILLKDGSILIYTDKGTMYRFVDVFKG >Mature_390_residues MKKLNVILLMILAFFTVIFQAEAAGRLYPYGEVKWMVEKAGKLSADVTITDNGLLYCPAGNKIICYDLSKGTKLWERKMD MGGKITQPLLVQNQIIYATGTEGIQQMRPNGSVTWLYRLLPKAKGSKSSAAVSAGPNNLIYLGVADGLYALEPLKSHKWR YSDEKNILALQGNEQAVYVCLGDKDKGYSLQAIDKQGAKLWQESLGTIKNIHMTFGSEGNLIVVTNPAALDRNTSAKIRC YDPKKGREEWSYSVKTQDITDISFSNDNTIFFCGNSRLYCLNGDNGQLKWDIPLLNVASGVAVDPSKKRIYAGSTDGRIF CVSFAGRLLWDKEIDKTTGQTLAKGGGIMVDTGKDEKDTITRAPILLKDGSILIYTDKGTMYRFVDVFKG
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43099; Mature: 43099
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNVILLMILAFFTVIFQAEAAGRLYPYGEVKWMVEKAGKLSADVTITDNGLLYCPAG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEECCC NKIICYDLSKGTKLWERKMDMGGKITQPLLVQNQIIYATGTEGIQQMRPNGSVTWLYRLL CEEEEEECCCCCHHHHHHHCCCCCCCCCEEECCEEEEEECCHHHHHHCCCCCEEEEEEEC PKAKGSKSSAAVSAGPNNLIYLGVADGLYALEPLKSHKWRYSDEKNILALQGNEQAVYVC CCCCCCCCCEEEECCCCCEEEEEECCCCEEECCHHHCCCCCCCCCCEEEEECCCCEEEEE LGDKDKGYSLQAIDKQGAKLWQESLGTIKNIHMTFGSEGNLIVVTNPAALDRNTSAKIRC ECCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCHHCCCCCCCEEEE YDPKKGREEWSYSVKTQDITDISFSNDNTIFFCGNSRLYCLNGDNGQLKWDIPLLNVASG ECCCCCCCCCEEEEECCEEEEEEECCCCEEEEECCCEEEEEECCCCEEEEECEEEECCCC VAVDPSKKRIYAGSTDGRIFCVSFAGRLLWDKEIDKTTGQTLAKGGGIMVDTGKDEKDTI CEECCCCCEEEECCCCCEEEEEEECCCEEECCCCCCCCCHHHHCCCCEEEECCCCCCCCE TRAPILLKDGSILIYTDKGTMYRFVDVFKG EECCEEEECCCEEEEECCCCEEEEEEECCC >Mature Secondary Structure MKKLNVILLMILAFFTVIFQAEAAGRLYPYGEVKWMVEKAGKLSADVTITDNGLLYCPAG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEECCC NKIICYDLSKGTKLWERKMDMGGKITQPLLVQNQIIYATGTEGIQQMRPNGSVTWLYRLL CEEEEEECCCCCHHHHHHHCCCCCCCCCEEECCEEEEEECCHHHHHHCCCCCEEEEEEEC PKAKGSKSSAAVSAGPNNLIYLGVADGLYALEPLKSHKWRYSDEKNILALQGNEQAVYVC CCCCCCCCCEEEECCCCCEEEEEECCCCEEECCHHHCCCCCCCCCCEEEEECCCCEEEEE LGDKDKGYSLQAIDKQGAKLWQESLGTIKNIHMTFGSEGNLIVVTNPAALDRNTSAKIRC ECCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCHHCCCCCCCEEEE YDPKKGREEWSYSVKTQDITDISFSNDNTIFFCGNSRLYCLNGDNGQLKWDIPLLNVASG ECCCCCCCCCEEEEECCEEEEEEECCCCEEEEECCCEEEEEECCCCEEEEECEEEECCCC VAVDPSKKRIYAGSTDGRIFCVSFAGRLLWDKEIDKTTGQTLAKGGGIMVDTGKDEKDTI CEECCCCCEEEECCCCCEEEEEEECCCEEECCCCCCCCCHHHHCCCCEEEECCCCCCCCE TRAPILLKDGSILIYTDKGTMYRFVDVFKG EECCEEEECCCEEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA