| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300083
Identifier: 134300083
GI number: 134300083
Start: 2451227
End: 2452279
Strand: Reverse
Name: 134300083
Synonym: Dred_2241
Alternate gene names: NA
Gene position: 2452279-2451227 (Counterclockwise)
Preceding gene: 134300084
Following gene: 134300082
Centisome position: 67.97
GC content: 43.59
Gene sequence:
>1053_bases ATGACTGAGCGGGCGAAGAAAGATGCCACTAAGGGTTTACGACTAAATATGATAATCGACCTTATTAATAAAAGAACACC CTATGGCGGGGTTACCGTTAATGAACTAATGGATAAATTTGAGGTTGCTGAGCGGCAGGTGTATAGGGATTTAAATACCA TTGCGAATGATCTGAGGGTTCCCCTGGTAAAACAGGAGCGGCATATTGAAGGGATTAAGAAAACCTGTTACTGCCTAGAA GTTGGCTATTTACCCAGCCTTAGTCCGGAAAAGGCTACAGTATTATTTTTGAGCTTGCTGCAGCAGAAGGGTTCTGCCTT GACTGGTCATTTAAATGAACTAAAGGATGCCCTGGTTTCCACTTTATTTAAGTATCATTACAATCCCAAAGAATTAGCGG TGGAAAAGCTGCAGAATCGTATCCACCTGGTGGAGGAAACCCTGGTGGAGCCGGAACAGGTAGGTGAGATGTTTTCAAAG CTAGTCCAGGCCTTGAAGGTTTGTTATCGGGTGAAAATTAAATATTTTGTTACTCACAGCCAGAAAGAGACTGAACGGGT AGTGGAACCCTATGGCCTGATTTGTAAAAGGCAGAATTGGTATCTGGTTGGTCAGTGTCTTGAACGGAATGCCATTCGTG TTTTCCGGGTTGATCAAATTAGAGATGTATTTCCGTATACTTCCGAAACCTTCCAGTACCCCACTGATTTTGATTTAAAG GAATATATGGCCCATAGCTGGGGTGTGATGAATGACGGAGAGGTATGTCAGATTAGGCTAAAGTTTAACCACCGTGTAGC TCACCGGGTAAAAAATTTGATATATCACCCATCGCAGGTTTTGGAAGAAGAGCTACCGGATGGGTCTATCATTGTTGGCT TTAGGGTTTGCGGTATAACAGAAATGAAGACATGGCTTGTCCAATGGGGAGATACAGTGGAAGTGCTGGAGCCGGGTTGG TTAAGGGAAGATATGTGTAAGTTGGCGGAGGGGATTTTGCGGGTTTATCAAGGTGAACTAGGAGATTTTAGTAATAGGAA GGTGGAAGCATGA
Upstream 100 bases:
>100_bases CTGTGGTTGATTTAGGTTAATTGCTAGAGGTTTTTGTATTATCCTGCCGAACTTAGATATTAGAAAATACCTTATTAGAA TAGGGCAGGAGGTTCTAATA
Downstream 100 bases:
>100_bases TGGGTAATATCGTTGATACCCTATGTGATATTAATATTGCAGTTGTTAAAAACCTGTGTGCCGTACAGGATTGTAGTATA ACAGTACTGCGGCGTCCCCC
Product: transcriptional regulator-like protein
Products: NA
Alternate protein names: Transcriptional Regulator; Regulatory Protein DeoR; Transcriptional Regulator-Like Protein; DeoR Family Transcriptional Regulator; HTH Domain Protein; GntR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator Protein-Like Protein; DeoR-Family Transcriptional Regulator; DNA-Bind Protein; Transcriptional Regulator Protein; Regulatory Protein Deor; Transcription Regulator; HTH-Type Transcriptional Regulator YobV; Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator-Like
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRVPLVKQERHIEGIKKTCYCLE VGYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVSTLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSK LVQALKVCYRVKIKYFVTHSQKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLK EYMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGITEMKTWLVQWGDTVEVLEPGW LREDMCKLAEGILRVYQGELGDFSNRKVEA
Sequences:
>Translated_350_residues MTERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRVPLVKQERHIEGIKKTCYCLE VGYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVSTLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSK LVQALKVCYRVKIKYFVTHSQKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLK EYMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGITEMKTWLVQWGDTVEVLEPGW LREDMCKLAEGILRVYQGELGDFSNRKVEA >Mature_349_residues TERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRVPLVKQERHIEGIKKTCYCLEV GYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVSTLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSKL VQALKVCYRVKIKYFVTHSQKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLKE YMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGITEMKTWLVQWGDTVEVLEPGWL REDMCKLAEGILRVYQGELGDFSNRKVEA
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40649; Mature: 40517
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRV CCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLVKQERHIEGIKKTCYCLEVGYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVS CHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSKLVQALKVCYRVKIKYFVTHS HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC QKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLK HHHHHHHHCCHHHEEECCCCEEHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCHH EYMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGIT HHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCHH EMKTWLVQWGDTVEVLEPGWLREDMCKLAEGILRVYQGELGDFSNRKVEA HHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRV CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLVKQERHIEGIKKTCYCLEVGYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVS CHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSKLVQALKVCYRVKIKYFVTHS HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC QKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLK HHHHHHHHCCHHHEEECCCCEEHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCHH EYMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGIT HHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCHH EMKTWLVQWGDTVEVLEPGWLREDMCKLAEGILRVYQGELGDFSNRKVEA HHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA