Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134300069

Identifier: 134300069

GI number: 134300069

Start: 2433659

End: 2434675

Strand: Reverse

Name: 134300069

Synonym: Dred_2227

Alternate gene names: NA

Gene position: 2434675-2433659 (Counterclockwise)

Preceding gene: 134300070

Following gene: 134300068

Centisome position: 67.48

GC content: 39.63

Gene sequence:

>1017_bases
ATGAATAAGTCATTTGTAAGAATCTTGGTAGGATTGTGTTGTGCAACATTGTTTCTTGGTATTTTATCCGGCTGTTCTTT
GACTTCTAAGGAGTCAACTGAAGCCACCAGTGGCACGGAGAAAATGTATAAAATCGGTATAACGCAGATAGCAGATCATC
CATCTTTAGATAATTGCCGTGAGGGTTTCATTGAAGGGCTAAAAGCAGAGGGTTTTGAAGAAGGGAAAAACGTTACCTTT
GATTACAAAAGTGCCAAAGGCGAAATAGCAACAGCAAACACCATTGCAACAAGCTTTGTTGGTAATAATTATGATCTTAT
TTGTGCAATTGCAACTCCATCTGCTCAGACAGCTTATACAGCCGCAGCTGAGAAAAAGATACCAGTTATTTTCTCAGCTG
TTTCTGATCCAGTTGCTGCAAAACTTGTCAATTCCCTTGAAAAACCCGGCAAAGGTTCAACCGGCACAAGTGATATTATC
CCAGTTGAAAAACAACTGGAAATGATCAGGGCCTTTATGCCAAAGGCGAAAAAAGTAGGTATTCTATACAACACCAGTGA
ACCGAATTCTGCCACTCAGATTGCTATGTATGAAGCTGCTGCGGCAAAATTCAATTTTGAAATCGTTAAGGTTGGCGTTG
CGGCCCAAGCCGATATTCCCATGGCCACCGATAACATTTTAGCAAAGGTTGATTGTATAACCAACCTTACCGATAACCTT
GTTGTTTCCAATCTTCAAACGGTGTTAGGTAAAGCAAATGCAAAGAAAATTCCTGTATTTGGCTCAGAAGAAGAGCAGGT
AAAAAATGGCTGTCTTGCTTCCCAGGGTATCGATTATATCAAGCTGGGTATGCAAACTGGTAAAATAGCCGCCAGGGTTT
TAAAAGGTGAAGATATTAATAATATCGCCGTCGAAACAATCAAAGAAAGTAAATTAGTTGTTAATGAGAATGTTTTGAAA
AACTTGAGCCTTACACTACCGGCAAGCCTTAAAGATACTGCACAAATGGTGAAATAA

Upstream 100 bases:

>100_bases
CATTTTGACCAATTTGGGTGGTACCGCAGGAATTTACTCTTGTCCCTTTCTAAGGGATAAGAGTTTTTTATTTTATAATT
TAATAGGGGGTATAGAAAAA

Downstream 100 bases:

>100_bases
AAAAGGTTCAAAAATATCGGAGGCATAAAAATGTTTGAAATAATTGTTGGTGTTTTTGAACAGGGTTTCATATATGGCAT
AATGGCTCTAGGAGTATATA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Periplasmic Protein; ABC Transporter Permease; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transporter; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNKSFVRILVGLCCATLFLGILSGCSLTSKESTEATSGTEKMYKIGITQIADHPSLDNCREGFIEGLKAEGFEEGKNVTF
DYKSAKGEIATANTIATSFVGNNYDLICAIATPSAQTAYTAAAEKKIPVIFSAVSDPVAAKLVNSLEKPGKGSTGTSDII
PVEKQLEMIRAFMPKAKKVGILYNTSEPNSATQIAMYEAAAAKFNFEIVKVGVAAQADIPMATDNILAKVDCITNLTDNL
VVSNLQTVLGKANAKKIPVFGSEEEQVKNGCLASQGIDYIKLGMQTGKIAARVLKGEDINNIAVETIKESKLVVNENVLK
NLSLTLPASLKDTAQMVK

Sequences:

>Translated_338_residues
MNKSFVRILVGLCCATLFLGILSGCSLTSKESTEATSGTEKMYKIGITQIADHPSLDNCREGFIEGLKAEGFEEGKNVTF
DYKSAKGEIATANTIATSFVGNNYDLICAIATPSAQTAYTAAAEKKIPVIFSAVSDPVAAKLVNSLEKPGKGSTGTSDII
PVEKQLEMIRAFMPKAKKVGILYNTSEPNSATQIAMYEAAAAKFNFEIVKVGVAAQADIPMATDNILAKVDCITNLTDNL
VVSNLQTVLGKANAKKIPVFGSEEEQVKNGCLASQGIDYIKLGMQTGKIAARVLKGEDINNIAVETIKESKLVVNENVLK
NLSLTLPASLKDTAQMVK
>Mature_338_residues
MNKSFVRILVGLCCATLFLGILSGCSLTSKESTEATSGTEKMYKIGITQIADHPSLDNCREGFIEGLKAEGFEEGKNVTF
DYKSAKGEIATANTIATSFVGNNYDLICAIATPSAQTAYTAAAEKKIPVIFSAVSDPVAAKLVNSLEKPGKGSTGTSDII
PVEKQLEMIRAFMPKAKKVGILYNTSEPNSATQIAMYEAAAAKFNFEIVKVGVAAQADIPMATDNILAKVDCITNLTDNL
VVSNLQTVLGKANAKKIPVFGSEEEQVKNGCLASQGIDYIKLGMQTGKIAARVLKGEDINNIAVETIKESKLVVNENVLK
NLSLTLPASLKDTAQMVK

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35943; Mature: 35943

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSFVRILVGLCCATLFLGILSGCSLTSKESTEATSGTEKMYKIGITQIADHPSLDNCR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
EGFIEGLKAEGFEEGKNVTFDYKSAKGEIATANTIATSFVGNNYDLICAIATPSAQTAYT
HHHHHHHCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHCCCCCEEEEEEECCCCCHHHH
AAAEKKIPVIFSAVSDPVAAKLVNSLEKPGKGSTGTSDIIPVEKQLEMIRAFMPKAKKVG
HHHCCCCCEEEEHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
ILYNTSEPNSATQIAMYEAAAAKFNFEIVKVGVAAQADIPMATDNILAKVDCITNLTDNL
EEEECCCCCCCCEEEEHHHHHHHCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHH
VVSNLQTVLGKANAKKIPVFGSEEEQVKNGCLASQGIDYIKLGMQTGKIAARVLKGEDIN
HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHCCCCEEEECCCHHHHHHHHHCCCCCC
NIAVETIKESKLVVNENVLKNLSLTLPASLKDTAQMVK
HHHHHHHHCCCEEECHHHHHCCCEECCCCHHHHHHHCC
>Mature Secondary Structure
MNKSFVRILVGLCCATLFLGILSGCSLTSKESTEATSGTEKMYKIGITQIADHPSLDNCR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
EGFIEGLKAEGFEEGKNVTFDYKSAKGEIATANTIATSFVGNNYDLICAIATPSAQTAYT
HHHHHHHCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHCCCCCEEEEEEECCCCCHHHH
AAAEKKIPVIFSAVSDPVAAKLVNSLEKPGKGSTGTSDIIPVEKQLEMIRAFMPKAKKVG
HHHCCCCCEEEEHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
ILYNTSEPNSATQIAMYEAAAAKFNFEIVKVGVAAQADIPMATDNILAKVDCITNLTDNL
EEEECCCCCCCCEEEEHHHHHHHCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHH
VVSNLQTVLGKANAKKIPVFGSEEEQVKNGCLASQGIDYIKLGMQTGKIAARVLKGEDIN
HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHCCCCEEEECCCHHHHHHHHHCCCCCC
NIAVETIKESKLVVNENVLKNLSLTLPASLKDTAQMVK
HHHHHHHHCCCEEECHHHHHCCCEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA