| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134300068
Identifier: 134300068
GI number: 134300068
Start: 2432747
End: 2433628
Strand: Reverse
Name: 134300068
Synonym: Dred_2226
Alternate gene names: NA
Gene position: 2433628-2432747 (Counterclockwise)
Preceding gene: 134300069
Following gene: 134300067
Centisome position: 67.45
GC content: 37.3
Gene sequence:
>882_bases ATGTTTGAAATAATTGTTGGTGTTTTTGAACAGGGTTTCATATATGGCATAATGGCTCTAGGAGTATATATAAGTTATAA AATATTGAACTTTCCTGACTTGACGGTTGACGGCAGTTTCCCGCTAGGGGCTGCCGTTACTGCTGTTTTACTTACGGCTG GAGTCAATCCTTGGATTGCACTGGTCTTATCTTTTTTTGTTGGCATTTTTGCCGGACTAATTACTGGTATCATACATGTA AAATTAAAGGTTACAGACCTTTTATCGGGCATATTAGTAATGACAGCACTTTATTCAGTTAATTACCGTATAGCTGGTAA AAAGGCCAATATACCGATTTTTGATAGTGATACCATATTCAATAGCGGTTTAGCAAAGCTTTTTCCCCCAGAGCTTTCTG GCTTTGTCGTCCTCTTTATTGTATTTATTGTTGCCCTTTTGATGAAATTTGCATTGGATTGGTATCTTAGCACAAAATCA GGCTTCCTGCTAAGGGCAACAGGAGATAACAAACAGTTCGTAACTTCTATTGCTAAGGATTATGGTACAGTTAAAATAAT TGGACTTGCCATTTCCAATGCTTTTGTAGCAATGTCTGGCTCAGTGGTTTGTCAGCAGCAAAAACTCTTTGATATATCCA TGGGTACAGGAACCATAGTAATGGGACTGGCAGCGGTTATTATTGGTTTAAATGTCTTTAAACCATTGGGTTTTTTGAAA CTAACCACGATGGTATTAGGTGGCTCAATAATTTATAAAGCGTGTATAGCAATTGCCTTTGAGGTGGGCTTTGACAATGC TGACATTCGTCTTATAACCGCAGTATTATTTCTTATTGCACTTATTGCAAATGGAAAAGTAATAAAAATTCGGGAGGAAT GA
Upstream 100 bases:
>100_bases GAATGTTTTGAAAAACTTGAGCCTTACACTACCGGCAAGCCTTAAAGATACTGCACAAATGGTGAAATAAAAAAGGTTCA AAAATATCGGAGGCATAAAA
Downstream 100 bases:
>100_bases AATTGCTCACCCTGAATCAAATATATAAAACCTATAACAAAGGCTCAATAAACGAATCCATACTTTTTTCTGGCTTTAAT CTTACGGTTTCTGAAGGGCA
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MFEIIVGVFEQGFIYGIMALGVYISYKILNFPDLTVDGSFPLGAAVTAVLLTAGVNPWIALVLSFFVGIFAGLITGIIHV KLKVTDLLSGILVMTALYSVNYRIAGKKANIPIFDSDTIFNSGLAKLFPPELSGFVVLFIVFIVALLMKFALDWYLSTKS GFLLRATGDNKQFVTSIAKDYGTVKIIGLAISNAFVAMSGSVVCQQQKLFDISMGTGTIVMGLAAVIIGLNVFKPLGFLK LTTMVLGGSIIYKACIAIAFEVGFDNADIRLITAVLFLIALIANGKVIKIREE
Sequences:
>Translated_293_residues MFEIIVGVFEQGFIYGIMALGVYISYKILNFPDLTVDGSFPLGAAVTAVLLTAGVNPWIALVLSFFVGIFAGLITGIIHV KLKVTDLLSGILVMTALYSVNYRIAGKKANIPIFDSDTIFNSGLAKLFPPELSGFVVLFIVFIVALLMKFALDWYLSTKS GFLLRATGDNKQFVTSIAKDYGTVKIIGLAISNAFVAMSGSVVCQQQKLFDISMGTGTIVMGLAAVIIGLNVFKPLGFLK LTTMVLGGSIIYKACIAIAFEVGFDNADIRLITAVLFLIALIANGKVIKIREE >Mature_293_residues MFEIIVGVFEQGFIYGIMALGVYISYKILNFPDLTVDGSFPLGAAVTAVLLTAGVNPWIALVLSFFVGIFAGLITGIIHV KLKVTDLLSGILVMTALYSVNYRIAGKKANIPIFDSDTIFNSGLAKLFPPELSGFVVLFIVFIVALLMKFALDWYLSTKS GFLLRATGDNKQFVTSIAKDYGTVKIIGLAISNAFVAMSGSVVCQQQKLFDISMGTGTIVMGLAAVIIGLNVFKPLGFLK LTTMVLGGSIIYKACIAIAFEVGFDNADIRLITAVLFLIALIANGKVIKIREE
Specific function: Unknown
COG id: COG4120
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 31477; Mature: 31477
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEIIVGVFEQGFIYGIMALGVYISYKILNFPDLTVDGSFPLGAAVTAVLLTAGVNPWIA CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCHHHHHHHHHHHCCCCHHHH LVLSFFVGIFAGLITGIIHVKLKVTDLLSGILVMTALYSVNYRIAGKKANIPIFDSDTIF HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCEEEECCCCCCCEECCCCHH NSGLAKLFPPELSGFVVLFIVFIVALLMKFALDWYLSTKSGFLLRATGDNKQFVTSIAKD HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHC YGTVKIIGLAISNAFVAMSGSVVCQQQKLFDISMGTGTIVMGLAAVIIGLNVFKPLGFLK CCCEEEEEEEHHCHHHEECCCEEEEHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LTTMVLGGSIIYKACIAIAFEVGFDNADIRLITAVLFLIALIANGKVIKIREE HHHHHHCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MFEIIVGVFEQGFIYGIMALGVYISYKILNFPDLTVDGSFPLGAAVTAVLLTAGVNPWIA CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCHHHHHHHHHHHCCCCHHHH LVLSFFVGIFAGLITGIIHVKLKVTDLLSGILVMTALYSVNYRIAGKKANIPIFDSDTIF HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCEEEECCCCCCCEECCCCHH NSGLAKLFPPELSGFVVLFIVFIVALLMKFALDWYLSTKSGFLLRATGDNKQFVTSIAKD HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHC YGTVKIIGLAISNAFVAMSGSVVCQQQKLFDISMGTGTIVMGLAAVIIGLNVFKPLGFLK CCCEEEEEEEHHCHHHEECCCEEEEHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LTTMVLGGSIIYKACIAIAFEVGFDNADIRLITAVLFLIALIANGKVIKIREE HHHHHHCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]