| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300038
Identifier: 134300038
GI number: 134300038
Start: 2399359
End: 2400213
Strand: Reverse
Name: 134300038
Synonym: Dred_2194
Alternate gene names: NA
Gene position: 2400213-2399359 (Counterclockwise)
Preceding gene: 134300039
Following gene: 134300037
Centisome position: 66.52
GC content: 41.17
Gene sequence:
>855_bases GTGGGCAAAATACGGTTTGGGCAGGTAGATTACCTAAATACGTTGCCAGTCTTTCATGCTTTAGAAGATGGCCTCCTGCC CTTTGATGGAGAATTAATCAAAGGACCACCCACCATGTTGAATAAAATGTTTATGGAAGATCAATTGGAAGTTGCATCTA TTTCTTCTGTTGAATATGCTAGAAATATTGATAAGTGCATTATTCTCCCTAATTTGTCCGTCAGTGCTGATGGACCGGTT CAAAGTATTTTATTGTTTAGCCGGGCCCCGATAGTGGAATTGGAAGGCAGGAAAATCTGCCTAACTTCTTCCTCGGCAAC CTCTGTTGCTTTATTAAAAGTACTTTTCCAACATTATTACCATTTAGAGGTTGAATATGTCACCCAAAAACCTGATTTAG ACAGCATGATGGCAGAAGGAGACGGTGCCTTACTCATTGGTGATGATGCCATGCGAGCTCATTTAAGAGTAAAACAGGAG AAATTAGCCTATCATGTAACGGACCTTGGAGAAGCTTGGAAACAATTTACTGGTGAACGTATGGTATACGCCCTTTGGGT TATCCGTAAGGAATTTGCCAAAGAAAACCCGGAAGTGGTTAATAACCTTTGTCATCAACTGGTGGAAGCTAAAAAACTTG CTGACCAGAGCCTGTCGGCAGTGTTAGAAAAAGGTCGTCGTAGAAGCGGGCTGCCGATGGAGATTTTAGAAGAATATTTT AATACAATTAATAACGCGTTTGCAGAGGACCATCGAAGGGCTTTATTAACCTTTTATGATTACTGTTACAAGAGCGGCCT TATTGAGGAGAGAGTACGATTGGCAATATGGGGTGAAGAAAATGTTGCAGGTTAA
Upstream 100 bases:
>100_bases AGTTTATGGCAAAGGCAAAATTAATAAATATAATAAAGGCTGCAGGTAAGCAACCAGTTGAACGAGATACAATGTACAAT GTTCTTGGGGAGGGTTTTTA
Downstream 100 bases:
>100_bases AGAGATACTCAATAAAGCTGTGGCAGGTGAGAGGTTAAGTGTAGAAGAGGGCGTTGCCCTCTTAAATTCTTCTGATTTAA TTCAACTGGGAGCAGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGKIRFGQVDYLNTLPVFHALEDGLLPFDGELIKGPPTMLNKMFMEDQLEVASISSVEYARNIDKCIILPNLSVSADGPV QSILLFSRAPIVELEGRKICLTSSSATSVALLKVLFQHYYHLEVEYVTQKPDLDSMMAEGDGALLIGDDAMRAHLRVKQE KLAYHVTDLGEAWKQFTGERMVYALWVIRKEFAKENPEVVNNLCHQLVEAKKLADQSLSAVLEKGRRRSGLPMEILEEYF NTINNAFAEDHRRALLTFYDYCYKSGLIEERVRLAIWGEENVAG
Sequences:
>Translated_284_residues MGKIRFGQVDYLNTLPVFHALEDGLLPFDGELIKGPPTMLNKMFMEDQLEVASISSVEYARNIDKCIILPNLSVSADGPV QSILLFSRAPIVELEGRKICLTSSSATSVALLKVLFQHYYHLEVEYVTQKPDLDSMMAEGDGALLIGDDAMRAHLRVKQE KLAYHVTDLGEAWKQFTGERMVYALWVIRKEFAKENPEVVNNLCHQLVEAKKLADQSLSAVLEKGRRRSGLPMEILEEYF NTINNAFAEDHRRALLTFYDYCYKSGLIEERVRLAIWGEENVAG >Mature_283_residues GKIRFGQVDYLNTLPVFHALEDGLLPFDGELIKGPPTMLNKMFMEDQLEVASISSVEYARNIDKCIILPNLSVSADGPVQ SILLFSRAPIVELEGRKICLTSSSATSVALLKVLFQHYYHLEVEYVTQKPDLDSMMAEGDGALLIGDDAMRAHLRVKQEK LAYHVTDLGEAWKQFTGERMVYALWVIRKEFAKENPEVVNNLCHQLVEAKKLADQSLSAVLEKGRRRSGLPMEILEEYFN TINNAFAEDHRRALLTFYDYCYKSGLIEERVRLAIWGEENVAG
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32161; Mature: 32030
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIRFGQVDYLNTLPVFHALEDGLLPFDGELIKGPPTMLNKMFMEDQLEVASISSVEYA CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH RNIDKCIILPNLSVSADGPVQSILLFSRAPIVELEGRKICLTSSSATSVALLKVLFQHYY HCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHH HLEVEYVTQKPDLDSMMAEGDGALLIGDDAMRAHLRVKQEKLAYHVTDLGEAWKQFTGER EEEEEEEECCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH MVYALWVIRKEFAKENPEVVNNLCHQLVEAKKLADQSLSAVLEKGRRRSGLPMEILEEYF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH NTINNAFAEDHRRALLTFYDYCYKSGLIEERVRLAIWGEENVAG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCC >Mature Secondary Structure GKIRFGQVDYLNTLPVFHALEDGLLPFDGELIKGPPTMLNKMFMEDQLEVASISSVEYA CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH RNIDKCIILPNLSVSADGPVQSILLFSRAPIVELEGRKICLTSSSATSVALLKVLFQHYY HCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHH HLEVEYVTQKPDLDSMMAEGDGALLIGDDAMRAHLRVKQEKLAYHVTDLGEAWKQFTGER EEEEEEEECCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH MVYALWVIRKEFAKENPEVVNNLCHQLVEAKKLADQSLSAVLEKGRRRSGLPMEILEEYF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH NTINNAFAEDHRRALLTFYDYCYKSGLIEERVRLAIWGEENVAG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA