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The map label for this gene is nirD [H]

Identifier: 134300004

GI number: 134300004

Start: 2362054

End: 2362515

Strand: Reverse

Name: nirD [H]

Synonym: Dred_2158

Alternate gene names: 134300004

Gene position: 2362515-2362054 (Counterclockwise)

Preceding gene: 134300005

Following gene: 134300003

Centisome position: 65.48

GC content: 40.48

Gene sequence:

>462_bases
ATGCAGCTGGATCATATTGATAAACACCTGCTTGATGTTGTCCAAACGGATTTTCCCATTTGTACGGAACCCTACAGGGT
GATTGGTGAAAAAATTGGTATCTCCGAACAGGAGGTTCTAGCACGTTTAGAATGTCTGATGCAGCAGGATGTGATCCGTC
GATTAGGTGGGGTTTTTGACTCTAGGAAGCTTGGCTATAAGGGAACGCTTTGTGCTATTAAAGTTCCTTCAGAGCGTATT
GATGAAGTAGCTGAGGTGATTAATAATTATATCGGCATTACTCACAACTACCTCCGGGATCACGAATACAATATGTGGTT
TACTATTCTGGCACAGTCATCGGAAAAAGTAGAGCAGATTCTTACCGAAATAAAAGCAAAGACAGGAATTAATGATGTGA
TTAATCTGCCATCCCAAAGGTTCTTTAAAGTCTTGGTGAATTTTAAAGTTCGTGAGACATAG

Upstream 100 bases:

>100_bases
GAAAGTTTGTGGTGGATGTCGGGCCAGAGCATATTTTTACCACGGGGACTATATGGCGGAAGAACCCTGGTGCTTATACC
ACGGTCGAAAGGGGTATTAA

Downstream 100 bases:

>100_bases
GAATAATTTGTTTAGTGAGGGAGAATATGACGTTAACGGATCTAGATAAAAAGATCGTTATAGAATTACAGGCCGGATTA
CCACTGGTGAGCAGACCCTT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MQLDHIDKHLLDVVQTDFPICTEPYRVIGEKIGISEQEVLARLECLMQQDVIRRLGGVFDSRKLGYKGTLCAIKVPSERI
DEVAEVINNYIGITHNYLRDHEYNMWFTILAQSSEKVEQILTEIKAKTGINDVINLPSQRFFKVLVNFKVRET

Sequences:

>Translated_153_residues
MQLDHIDKHLLDVVQTDFPICTEPYRVIGEKIGISEQEVLARLECLMQQDVIRRLGGVFDSRKLGYKGTLCAIKVPSERI
DEVAEVINNYIGITHNYLRDHEYNMWFTILAQSSEKVEQILTEIKAKTGINDVINLPSQRFFKVLVNFKVRET
>Mature_153_residues
MQLDHIDKHLLDVVQTDFPICTEPYRVIGEKIGISEQEVLARLECLMQQDVIRRLGGVFDSRKLGYKGTLCAIKVPSERI
DEVAEVINNYIGITHNYLRDHEYNMWFTILAQSSEKVEQILTEIKAKTGINDVINLPSQRFFKVLVNFKVRET

Specific function: Required for the biosynthesis of heme D1 of nitrite reductase [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17695; Mature: 17695

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDHIDKHLLDVVQTDFPICTEPYRVIGEKIGISEQEVLARLECLMQQDVIRRLGGVFD
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHC
SRKLGYKGTLCAIKVPSERIDEVAEVINNYIGITHNYLRDHEYNMWFTILAQSSEKVEQI
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCHHHHHHH
LTEIKAKTGINDVINLPSQRFFKVLVNFKVRET
HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLDHIDKHLLDVVQTDFPICTEPYRVIGEKIGISEQEVLARLECLMQQDVIRRLGGVFD
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHC
SRKLGYKGTLCAIKVPSERIDEVAEVINNYIGITHNYLRDHEYNMWFTILAQSSEKVEQI
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCHHHHHHH
LTEIKAKTGINDVINLPSQRFFKVLVNFKVRET
HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7588711 [H]