Click here to switch to the map view.

The map label for this gene is nirL [H]

Identifier: 134300003

GI number: 134300003

Start: 2361554

End: 2362027

Strand: Reverse

Name: nirL [H]

Synonym: Dred_2157

Alternate gene names: 134300003

Gene position: 2362027-2361554 (Counterclockwise)

Preceding gene: 134300004

Following gene: 134300002

Centisome position: 65.46

GC content: 43.46

Gene sequence:

>474_bases
ATGACGTTAACGGATCTAGATAAAAAGATCGTTATAGAATTACAGGCCGGATTACCACTGGTGAGCAGACCCTTTGAAAC
CTTGGCTAGAAAATTAGACATCACAGAAGAAGAGCTTATCACACGGGTCCATGCTATCCAGCAAGCTGGCATTATGCGCC
GAATTGGTGCTGCTCTGAGGCATCACCGGGTTGGTTTTAAAGCCAATGCCATGATTGTCTGGCAAATTTCAGAGGATAAA
ATTCTAGAAGTTGGGGAACAGATGGCAAAATTGCCAGAAGTAACCCATTGCTATCAGAGGGCAGCCTTGCCCCAATGGCC
TTATAATTTCTACACCATGGTACATGGTCAGAGCCGGGAAGAATGTCAAAACATTGCGGTAAGACTTTCAGAGATTGCCG
GTGTCACAAATTATCGCTTGCTCTACAGTGTAACAGAATTAAAGAAAAGCAGCATGAAATATTTCATGGATTAG

Upstream 100 bases:

>100_bases
TTAATGATGTGATTAATCTGCCATCCCAAAGGTTCTTTAAAGTCTTGGTGAATTTTAAAGTTCGTGAGACATAGGAATAA
TTTGTTTAGTGAGGGAGAAT

Downstream 100 bases:

>100_bases
GAGGTACCTAATGGCTCCCAGCTACCAAAAATCAGAGGAAATGTTTGAACAAGCCCAAAGGATTATCCCTGGCGGTGTAA
ACAGCCCCGTACGAGCCTTT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTLTDLDKKIVIELQAGLPLVSRPFETLARKLDITEEELITRVHAIQQAGIMRRIGAALRHHRVGFKANAMIVWQISEDK
ILEVGEQMAKLPEVTHCYQRAALPQWPYNFYTMVHGQSREECQNIAVRLSEIAGVTNYRLLYSVTELKKSSMKYFMD

Sequences:

>Translated_157_residues
MTLTDLDKKIVIELQAGLPLVSRPFETLARKLDITEEELITRVHAIQQAGIMRRIGAALRHHRVGFKANAMIVWQISEDK
ILEVGEQMAKLPEVTHCYQRAALPQWPYNFYTMVHGQSREECQNIAVRLSEIAGVTNYRLLYSVTELKKSSMKYFMD
>Mature_156_residues
TLTDLDKKIVIELQAGLPLVSRPFETLARKLDITEEELITRVHAIQQAGIMRRIGAALRHHRVGFKANAMIVWQISEDKI
LEVGEQMAKLPEVTHCYQRAALPQWPYNFYTMVHGQSREECQNIAVRLSEIAGVTNYRLLYSVTELKKSSMKYFMD

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18091; Mature: 17960

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTDLDKKIVIELQAGLPLVSRPFETLARKLDITEEELITRVHAIQQAGIMRRIGAALR
CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HHRVGFKANAMIVWQISEDKILEVGEQMAKLPEVTHCYQRAALPQWPYNFYTMVHGQSRE
HHCCCCEECEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHH
ECQNIAVRLSEIAGVTNYRLLYSVTELKKSSMKYFMD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLTDLDKKIVIELQAGLPLVSRPFETLARKLDITEEELITRVHAIQQAGIMRRIGAALR
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HHRVGFKANAMIVWQISEDKILEVGEQMAKLPEVTHCYQRAALPQWPYNFYTMVHGQSRE
HHCCCCEECEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHH
ECQNIAVRLSEIAGVTNYRLLYSVTELKKSSMKYFMD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7588711 [H]