| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299920
Identifier: 134299920
GI number: 134299920
Start: 2271449
End: 2272396
Strand: Reverse
Name: 134299920
Synonym: Dred_2074
Alternate gene names: NA
Gene position: 2272396-2271449 (Counterclockwise)
Preceding gene: 134299921
Following gene: 134299919
Centisome position: 62.98
GC content: 48.63
Gene sequence:
>948_bases TTGAAGATAAAAACGAAATTGTGTGATTTACTAGGGATTGAGTACCCAATTTTGCAAGGGGGTATGGCCTGGGTCTCCAC TGCTGAGCTGGCTGCTGCGGTATCAGAAGCTGGTGGACTTGGCATTATTGGGTCTGGTCATGCGCCAACCGAGTGGTTGG AGGAACAGATTTGGTTGGCCAAAAAACTAACGAACAAACCCTTTGGGGTTAACATTATGTTGATGTCCCCCTTTGTGGAA CAAAACATGCAATTAATTATTGATGAAAGGGTTTCGCTGGTTACCACTGGTGCAGGCAACCCCGGAAAATATGTTCCCGC ATTGAAAGAGGTTGGTACTAAGGTGATACCTGTTGTTCCCTCTGTGGCCCTAGCCCAGCGTATGGCTAAAGCTGGGGTGG ATGCCTTGATTGCCGAGGGAGGAGAATCCGGGGGTCACATTGGAGAACTGCATACCATGCCACTGGTTCCCCAGGTGGTG GATGCCGTAGACATTCCGGTTATTGCCGCAGGAGGTTTCTTTGATGGCAGAGGATTGGTAGCTGCGTTGGCCCTAGGTGC ACAGGGGATTCAAATGGGTACACGTTTCATGTGTGCTACGGAATGTACCGTCCACGATAATGTAAAAAACATCTTGATTA AAGCCAGAGACCGCGAAACCGTTGTTACTGGCCGTAGTACAGGGCACCCGGTACGGGTTATTCGTAATAAGCTGACTAGG CATTTTGAAGAGAGAGAGCGTCAGGGTGCTTCCCTTGAAGAATTGGAGAAATTGGGGGTTGGACGTCTTCGCATGGCCAT GGTAGAAGGTGATATCCAGCAAGGTTCTGTAATGGCTGGGCAGATTTGTGGTATGGTTAAAAAAATAGAACCGGCCGAAG AGATCATTCAGGAAATTATTGGTGGTGCAGAGCAAGTATTAGCGCGGTTAGCTGGAGGTGAATTTTAG
Upstream 100 bases:
>100_bases CGTGTGAAGGCTGGAGATAACCTTGTGATGGTGGCCTTTGGGGCTGGTTTAACCTCTGGTGGAGTTGTACTGAAGTGGAG AGACAGGGAGGGATAGGTAC
Downstream 100 bases:
>100_bases AAATTGACTAAGGTAGCATTTGTTTTCCCGGGCCAGGGTTCCCAGTATGTGGGCATGGGCAGGGAGTTATATAATAACTT TCAAGTAGTTCGTGAAACCA
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKIKTKLCDLLGIEYPILQGGMAWVSTAELAAAVSEAGGLGIIGSGHAPTEWLEEQIWLAKKLTNKPFGVNIMLMSPFVE QNMQLIIDERVSLVTTGAGNPGKYVPALKEVGTKVIPVVPSVALAQRMAKAGVDALIAEGGESGGHIGELHTMPLVPQVV DAVDIPVIAAGGFFDGRGLVAALALGAQGIQMGTRFMCATECTVHDNVKNILIKARDRETVVTGRSTGHPVRVIRNKLTR HFEERERQGASLEELEKLGVGRLRMAMVEGDIQQGSVMAGQICGMVKKIEPAEEIIQEIIGGAEQVLARLAGGEF
Sequences:
>Translated_315_residues MKIKTKLCDLLGIEYPILQGGMAWVSTAELAAAVSEAGGLGIIGSGHAPTEWLEEQIWLAKKLTNKPFGVNIMLMSPFVE QNMQLIIDERVSLVTTGAGNPGKYVPALKEVGTKVIPVVPSVALAQRMAKAGVDALIAEGGESGGHIGELHTMPLVPQVV DAVDIPVIAAGGFFDGRGLVAALALGAQGIQMGTRFMCATECTVHDNVKNILIKARDRETVVTGRSTGHPVRVIRNKLTR HFEERERQGASLEELEKLGVGRLRMAMVEGDIQQGSVMAGQICGMVKKIEPAEEIIQEIIGGAEQVLARLAGGEF >Mature_315_residues MKIKTKLCDLLGIEYPILQGGMAWVSTAELAAAVSEAGGLGIIGSGHAPTEWLEEQIWLAKKLTNKPFGVNIMLMSPFVE QNMQLIIDERVSLVTTGAGNPGKYVPALKEVGTKVIPVVPSVALAQRMAKAGVDALIAEGGESGGHIGELHTMPLVPQVV DAVDIPVIAAGGFFDGRGLVAALALGAQGIQMGTRFMCATECTVHDNVKNILIKARDRETVVTGRSTGHPVRVIRNKLTR HFEERERQGASLEELEKLGVGRLRMAMVEGDIQQGSVMAGQICGMVKKIEPAEEIIQEIIGGAEQVLARLAGGEF
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 33504; Mature: 33504
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTKLCDLLGIEYPILQGGMAWVSTAELAAAVSEAGGLGIIGSGHAPTEWLEEQIWLA CCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH KKLTNKPFGVNIMLMSPFVEQNMQLIIDERVSLVTTGAGNPGKYVPALKEVGTKVIPVVP HHHCCCCCCEEEEEECCHHHCCHHEEECCCEEEEEECCCCCCCCCHHHHHCCCEEECCCC SVALAQRMAKAGVDALIAEGGESGGHIGELHTMPLVPQVVDAVDIPVIAAGGFFDGRGLV HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHH AALALGAQGIQMGTRFMCATECTVHDNVKNILIKARDRETVVTGRSTGHPVRVIRNKLTR HHHHHCCCHHHHCCEEEEEECCEECCCHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHH HFEERERQGASLEELEKLGVGRLRMAMVEGDIQQGSVMAGQICGMVKKIEPAEEIIQEII HHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH GGAEQVLARLAGGEF CCHHHHHHHHHCCCC >Mature Secondary Structure MKIKTKLCDLLGIEYPILQGGMAWVSTAELAAAVSEAGGLGIIGSGHAPTEWLEEQIWLA CCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH KKLTNKPFGVNIMLMSPFVEQNMQLIIDERVSLVTTGAGNPGKYVPALKEVGTKVIPVVP HHHCCCCCCEEEEEECCHHHCCHHEEECCCEEEEEECCCCCCCCCHHHHHCCCEEECCCC SVALAQRMAKAGVDALIAEGGESGGHIGELHTMPLVPQVVDAVDIPVIAAGGFFDGRGLV HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHH AALALGAQGIQMGTRFMCATECTVHDNVKNILIKARDRETVVTGRSTGHPVRVIRNKLTR HHHHHCCCHHHHCCEEEEEECCEECCCHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHH HFEERERQGASLEELEKLGVGRLRMAMVEGDIQQGSVMAGQICGMVKKIEPAEEIIQEII HHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH GGAEQVLARLAGGEF CCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA