| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is fabH [H]
Identifier: 134299921
GI number: 134299921
Start: 2272401
End: 2273408
Strand: Reverse
Name: fabH [H]
Synonym: Dred_2075
Alternate gene names: 134299921
Gene position: 2273408-2272401 (Counterclockwise)
Preceding gene: 134299922
Following gene: 134299920
Centisome position: 63.01
GC content: 47.12
Gene sequence:
>1008_bases ATGCCCAACCACCTGATTCGAGCGGGCATCCTAGGTGTGGGGAGTTATGTGCCTGAACGAATACTTACCAATAAAGAGTT AGAAAAAATAGTGGATACCAGTGACGAATGGATAAAGTCCCGTACCGGGATAAAGGAACGTAGAATAGCCGAACCAGGAA AATCCACGTCGGATCTGGCAACCATAGCATCCAGAAGGGCGCTGGAGCATGCCGGGATAAAGCCGGAGGAACTGGACTTA ATTATATTAACTACTTGTTCTAAGGATATGATCATACCCGCAGGGGCCTGTCTGGTTCAACAGGAACTAGGTGCAACAAA GGCGGGGGCCTTTGACCTAGAAGCAGGTTGTTCTGGTTTTGTATATGGTCTTAGTATTGCGACACAGTTTATTGCTACCG GAGCCATGAAACATGTTCTTGTTATTGGTTCTGAGGTTTTGTCGAAGGTGGTAAACTGGGATGATCGGAATACTTGTGTT TTATTTGGTGATGGTGCAGGGGCCGTTGTGGTGGGACCAGTGAGTTCTGATGAAGGAGTTTTGGCCAGCAAGTTGAGTGC TGAGGGAGCAGGTTGGGAACACCTGTATATCCCGGCTGGTGGTTCAAAAATGCCTGCGGATCCGGTCACTGTTGAGAAAA AGCTGCATTACATACACATGAATGGTAAAGAAGTTTTTCGCTATGCAGTACGGGTAATGGAGGAAGCGTCCTTAACCCTT TTAAAGGCAGCAAATTTGGAACTGAGTGATATTGATCTGTTAATTCCACACCAGGCCAACATGCGGATTATTGAGCACGC TGCTAAAAAATTACGTTTGCCAATGGATAAAGTGGCTGTGAATTTAGATCGCTATGGAAACACCTCTTCTGCTTCTATAC CCATTGCTCTGGCCGAAGCCGTTCATTCGGGTCGTGTGAAGGCTGGAGATAACCTTGTGATGGTGGCCTTTGGGGCTGGT TTAACCTCTGGTGGAGTTGTACTGAAGTGGAGAGACAGGGAGGGATAG
Upstream 100 bases:
>100_bases TATTAAAAATGCCCTGCGAGTGGCAAAGGAAACTGTGGAACAGGGTCTGGTTCCAGCCATTAAAGAAAGTTTGGAAAATG ATAAGGGGGTAGAGGAGTAA
Downstream 100 bases:
>100_bases GTACTTGAAGATAAAAACGAAATTGTGTGATTTACTAGGGATTGAGTACCCAATTTTGCAAGGGGGTATGGCCTGGGTCT CCACTGCTGAGCTGGCTGCT
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MPNHLIRAGILGVGSYVPERILTNKELEKIVDTSDEWIKSRTGIKERRIAEPGKSTSDLATIASRRALEHAGIKPEELDL IILTTCSKDMIIPAGACLVQQELGATKAGAFDLEAGCSGFVYGLSIATQFIATGAMKHVLVIGSEVLSKVVNWDDRNTCV LFGDGAGAVVVGPVSSDEGVLASKLSAEGAGWEHLYIPAGGSKMPADPVTVEKKLHYIHMNGKEVFRYAVRVMEEASLTL LKAANLELSDIDLLIPHQANMRIIEHAAKKLRLPMDKVAVNLDRYGNTSSASIPIALAEAVHSGRVKAGDNLVMVAFGAG LTSGGVVLKWRDREG
Sequences:
>Translated_335_residues MPNHLIRAGILGVGSYVPERILTNKELEKIVDTSDEWIKSRTGIKERRIAEPGKSTSDLATIASRRALEHAGIKPEELDL IILTTCSKDMIIPAGACLVQQELGATKAGAFDLEAGCSGFVYGLSIATQFIATGAMKHVLVIGSEVLSKVVNWDDRNTCV LFGDGAGAVVVGPVSSDEGVLASKLSAEGAGWEHLYIPAGGSKMPADPVTVEKKLHYIHMNGKEVFRYAVRVMEEASLTL LKAANLELSDIDLLIPHQANMRIIEHAAKKLRLPMDKVAVNLDRYGNTSSASIPIALAEAVHSGRVKAGDNLVMVAFGAG LTSGGVVLKWRDREG >Mature_334_residues PNHLIRAGILGVGSYVPERILTNKELEKIVDTSDEWIKSRTGIKERRIAEPGKSTSDLATIASRRALEHAGIKPEELDLI ILTTCSKDMIIPAGACLVQQELGATKAGAFDLEAGCSGFVYGLSIATQFIATGAMKHVLVIGSEVLSKVVNWDDRNTCVL FGDGAGAVVVGPVSSDEGVLASKLSAEGAGWEHLYIPAGGSKMPADPVTVEKKLHYIHMNGKEVFRYAVRVMEEASLTLL KAANLELSDIDLLIPHQANMRIIEHAAKKLRLPMDKVAVNLDRYGNTSSASIPIALAEAVHSGRVKAGDNLVMVAFGAGL TSGGVVLKWRDREG
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=321, Percent_Identity=45.7943925233645, Blast_Score=285, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 35802; Mature: 35671
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNHLIRAGILGVGSYVPERILTNKELEKIVDTSDEWIKSRTGIKERRIAEPGKSTSDLA CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCCHHHHH TIASRRALEHAGIKPEELDLIILTTCSKDMIIPAGACLVQQELGATKAGAFDLEAGCSGF HHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCHHHHHHHHCCCCCCCEECCCCCCHH VYGLSIATQFIATGAMKHVLVIGSEVLSKVVNWDDRNTCVLFGDGAGAVVVGPVSSDEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCH LASKLSAEGAGWEHLYIPAGGSKMPADPVTVEKKLHYIHMNGKEVFRYAVRVMEEASLTL HHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHEEE LKAANLELSDIDLLIPHQANMRIIEHAAKKLRLPMDKVAVNLDRYGNTSSASIPIALAEA EEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHEEEHHHCCCCCCCCCHHHHHHH VHSGRVKAGDNLVMVAFGAGLTSGGVVLKWRDREG HHCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCC >Mature Secondary Structure PNHLIRAGILGVGSYVPERILTNKELEKIVDTSDEWIKSRTGIKERRIAEPGKSTSDLA CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCCHHHHH TIASRRALEHAGIKPEELDLIILTTCSKDMIIPAGACLVQQELGATKAGAFDLEAGCSGF HHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCHHHHHHHHCCCCCCCEECCCCCCHH VYGLSIATQFIATGAMKHVLVIGSEVLSKVVNWDDRNTCVLFGDGAGAVVVGPVSSDEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCH LASKLSAEGAGWEHLYIPAGGSKMPADPVTVEKKLHYIHMNGKEVFRYAVRVMEEASLTL HHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHEEE LKAANLELSDIDLLIPHQANMRIIEHAAKKLRLPMDKVAVNLDRYGNTSSASIPIALAEA EEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHEEEHHHCCCCCCCCCHHHHHHH VHSGRVKAGDNLVMVAFGAGLTSGGVVLKWRDREG HHCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]