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The map label for this gene is trpH [H]

Identifier: 134299764

GI number: 134299764

Start: 2103270

End: 2104097

Strand: Reverse

Name: trpH [H]

Synonym: Dred_1914

Alternate gene names: 134299764

Gene position: 2104097-2103270 (Counterclockwise)

Preceding gene: 134299765

Following gene: 134299763

Centisome position: 58.32

GC content: 39.61

Gene sequence:

>828_bases
ATGCAGTATGCCGATTTACATATTCACACAACGGCTTCAGATGGTTCAGATACCCCTTCTGAGGTGGTTCATAAAGCCTT
AGAAATTGGCCTTCGTGCCATTGCTATTTCGGATCACGATACAATGGATGGAGTTCTTGAAGCAGAGCGAGCCGCAGAAA
AATTTAATCTGGAAGTAATTTCTGGAGTGGAAGTTAATACCTTTTTTGAGGGAAAAGAAATTCATATTTTAGGGTATTTA
ATCGATCCTTGTAATGAAAAATTCGTTGCGAAATTGAAAGAATTGCAAGGGGATCGAATGACTAGGATTAAAAAAATGGT
TGACAAATTAAATAAACTTAATATAAAAATTGAATTAGAGCGTGTATTAGAATTGTCTTCTGGCGGATCCGTTGGGAGGC
CGCATATTGCCCGAGCCTTAGTGGAGAGGGGATATGTATTAACTCTGCAGGAGGCCTTTACAAACTACCTAGGAGTGGGT
AAACCAGCCTTTGTGTCCAGGGAAAAGCTTTCCCCTAAGGAGGCAATTCGTTTAATAACGAGGGCGAAGGGAGTTCCTGT
TTTAGCTCACCCCGGGTTGTCTAAAATTAATACATATCTGTTAGATTTGGTTAATGAAGGATTAAAGGGATTAGAGGTAT
GGCATAAAAACCATACACCATTAATGGTTGAGTACTATGCCGAGATAGCAAAAAAATACAATTTAGTCCCTACTGGTGGA
TCAGATTACCATGGCTCTGCCCATGATACATGCAATATTTTGGGTGGTGCAGTGGCCCCATTTGATTCGGTGCAATTATT
AAAAAATGCTCACCAGAAACTATTTTAA

Upstream 100 bases:

>100_bases
GGTATTTAAAGAGGTATGCGGTTAATCCTATACAAAGGAAAGCTGTTATATTGAATATAAATGAATGGTAATAATGTATA
GAAAAAAGACGGTGATATTC

Downstream 100 bases:

>100_bases
ATATAGGACTTACTGAACGGAGTTGATTTCAATGAAATTGGCAAGAAGAATGGAAGCACTGGTTTCTGGAATATTCACAG
AATTAGCCAATGCCAGAGCT

Product: phosphotransferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MQYADLHIHTTASDGSDTPSEVVHKALEIGLRAIAISDHDTMDGVLEAERAAEKFNLEVISGVEVNTFFEGKEIHILGYL
IDPCNEKFVAKLKELQGDRMTRIKKMVDKLNKLNIKIELERVLELSSGGSVGRPHIARALVERGYVLTLQEAFTNYLGVG
KPAFVSREKLSPKEAIRLITRAKGVPVLAHPGLSKINTYLLDLVNEGLKGLEVWHKNHTPLMVEYYAEIAKKYNLVPTGG
SDYHGSAHDTCNILGGAVAPFDSVQLLKNAHQKLF

Sequences:

>Translated_275_residues
MQYADLHIHTTASDGSDTPSEVVHKALEIGLRAIAISDHDTMDGVLEAERAAEKFNLEVISGVEVNTFFEGKEIHILGYL
IDPCNEKFVAKLKELQGDRMTRIKKMVDKLNKLNIKIELERVLELSSGGSVGRPHIARALVERGYVLTLQEAFTNYLGVG
KPAFVSREKLSPKEAIRLITRAKGVPVLAHPGLSKINTYLLDLVNEGLKGLEVWHKNHTPLMVEYYAEIAKKYNLVPTGG
SDYHGSAHDTCNILGGAVAPFDSVQLLKNAHQKLF
>Mature_275_residues
MQYADLHIHTTASDGSDTPSEVVHKALEIGLRAIAISDHDTMDGVLEAERAAEKFNLEVISGVEVNTFFEGKEIHILGYL
IDPCNEKFVAKLKELQGDRMTRIKKMVDKLNKLNIKIELERVLELSSGGSVGRPHIARALVERGYVLTLQEAFTNYLGVG
KPAFVSREKLSPKEAIRLITRAKGVPVLAHPGLSKINTYLLDLVNEGLKGLEVWHKNHTPLMVEYYAEIAKKYNLVPTGG
SDYHGSAHDTCNILGGAVAPFDSVQLLKNAHQKLF

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=250, Percent_Identity=36, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30405; Mature: 30405

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYADLHIHTTASDGSDTPSEVVHKALEIGLRAIAISDHDTMDGVLEAERAAEKFNLEVI
CCCEEEEEEEECCCCCCCHHHHHHHHHHHCHHEEEECCCCHHHHHHHHHHHHHHCCEEEE
SGVEVNTFFEGKEIHILGYLIDPCNEKFVAKLKELQGDRMTRIKKMVDKLNKLNIKIELE
CCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEHH
RVLELSSGGSVGRPHIARALVERGYVLTLQEAFTNYLGVGKPAFVSREKLSPKEAIRLIT
HHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHH
RAKGVPVLAHPGLSKINTYLLDLVNEGLKGLEVWHKNHTPLMVEYYAEIAKKYNLVPTGG
HHCCCCEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
SDYHGSAHDTCNILGGAVAPFDSVQLLKNAHQKLF
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQYADLHIHTTASDGSDTPSEVVHKALEIGLRAIAISDHDTMDGVLEAERAAEKFNLEVI
CCCEEEEEEEECCCCCCCHHHHHHHHHHHCHHEEEECCCCHHHHHHHHHHHHHHCCEEEE
SGVEVNTFFEGKEIHILGYLIDPCNEKFVAKLKELQGDRMTRIKKMVDKLNKLNIKIELE
CCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEHH
RVLELSSGGSVGRPHIARALVERGYVLTLQEAFTNYLGVGKPAFVSREKLSPKEAIRLIT
HHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHH
RAKGVPVLAHPGLSKINTYLLDLVNEGLKGLEVWHKNHTPLMVEYYAEIAKKYNLVPTGG
HHCCCCEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
SDYHGSAHDTCNILGGAVAPFDSVQLLKNAHQKLF
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]