| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299765
Identifier: 134299765
GI number: 134299765
Start: 2104173
End: 2105114
Strand: Reverse
Name: 134299765
Synonym: Dred_1915
Alternate gene names: NA
Gene position: 2105114-2104173 (Counterclockwise)
Preceding gene: 134299766
Following gene: 134299764
Centisome position: 58.34
GC content: 41.51
Gene sequence:
>942_bases ATGCTGATTGTAGATGCCCATTGTGACACCTTGACTGTCCTCACCCCACAAGGAAGAGATTTAGGAACTCTTTCCCAACG GGGTCACATAGATATACCTAGGTTATATAGAGGTGGTATAAATGTTCAGTTTTTCGCCATTTTTATTGGACCTGATAATT ACCATGACCCAGCGCAATACACGAAGGAAATTCTAAAGTTGTTTAATAAAGAAATCCAAAGGAATGCGTCTTCTTTATTG CATGCCCGCAATTACGCTGATATTGTACATGCTTATGATTCAAAAAAGATTTGTGCTGTCCTTACCATTGAGGGTGGAGA AGCATTAAAGGGGAAAATTGAGCAACTGGAAAGCTACTATACACAGGGGATTAGGGGCCTGACTTTAACCTGGAACGGTA GGAATGAATTAGGGGATGGAGTGGGTTTAGGCCCCGAGGCATCAGGATTAACCGTTTTTGGACGACAGGTGATTCAAAAA ATGGTAGAATTGGGTATGATGATTGATGTATCCCATTTATCTGAAGCAGGGTTTTGGGATGTTATATCAGAGATACGGGC ACCCATTACTGCTTCCCATGCCAACAGCAGATTTATCTGTGACCATCCCAGAAACTTAACCGATCAACAAATTCGAGTTA TTTCCGAAAGCGGAGGAGTTATAGGGGTTACCTATGTGCCTCAGTTTATTGATCTAAGTAAACCGTCTATTGAACGGCTC ATTGAGCATATTGACCATATCTATGAGGTGGGAGGAATCTCTTGTATCGGACTAGGCTCTGATTTTGACGGCATTGATGC GACTGTAGAGGGTCTACATGATGCAAGTATAGCAGTTCCTAATTTAGAAAATGCCCTTATAAAAAAGGGTTACACCACTG GTGAAATCGAAAAGATAATGGGTGAGAACTGGTTAAGGGTATTTAAAGAGGTATGCGGTTAA
Upstream 100 bases:
>100_bases AGTTAGTTCGGTACAACCTGTTTGCAAAAATAGCAAACAGGTTTCTTGCTTACTAGTGGTATTAAATTGATAACGAAGGT GGTAGGAAAGGAGGGGCATG
Downstream 100 bases:
>100_bases TCCTATACAAAGGAAAGCTGTTATATTGAATATAAATGAATGGTAATAATGTATAGAAAAAAGACGGTGATATTCATGCA GTATGCCGATTTACATATTC
Product: membrane dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLIVDAHCDTLTVLTPQGRDLGTLSQRGHIDIPRLYRGGINVQFFAIFIGPDNYHDPAQYTKEILKLFNKEIQRNASSLL HARNYADIVHAYDSKKICAVLTIEGGEALKGKIEQLESYYTQGIRGLTLTWNGRNELGDGVGLGPEASGLTVFGRQVIQK MVELGMMIDVSHLSEAGFWDVISEIRAPITASHANSRFICDHPRNLTDQQIRVISESGGVIGVTYVPQFIDLSKPSIERL IEHIDHIYEVGGISCIGLGSDFDGIDATVEGLHDASIAVPNLENALIKKGYTTGEIEKIMGENWLRVFKEVCG
Sequences:
>Translated_313_residues MLIVDAHCDTLTVLTPQGRDLGTLSQRGHIDIPRLYRGGINVQFFAIFIGPDNYHDPAQYTKEILKLFNKEIQRNASSLL HARNYADIVHAYDSKKICAVLTIEGGEALKGKIEQLESYYTQGIRGLTLTWNGRNELGDGVGLGPEASGLTVFGRQVIQK MVELGMMIDVSHLSEAGFWDVISEIRAPITASHANSRFICDHPRNLTDQQIRVISESGGVIGVTYVPQFIDLSKPSIERL IEHIDHIYEVGGISCIGLGSDFDGIDATVEGLHDASIAVPNLENALIKKGYTTGEIEKIMGENWLRVFKEVCG >Mature_313_residues MLIVDAHCDTLTVLTPQGRDLGTLSQRGHIDIPRLYRGGINVQFFAIFIGPDNYHDPAQYTKEILKLFNKEIQRNASSLL HARNYADIVHAYDSKKICAVLTIEGGEALKGKIEQLESYYTQGIRGLTLTWNGRNELGDGVGLGPEASGLTVFGRQVIQK MVELGMMIDVSHLSEAGFWDVISEIRAPITASHANSRFICDHPRNLTDQQIRVISESGGVIGVTYVPQFIDLSKPSIERL IEHIDHIYEVGGISCIGLGSDFDGIDATVEGLHDASIAVPNLENALIKKGYTTGEIEKIMGENWLRVFKEVCG
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=291, Percent_Identity=29.553264604811, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI4758190, Length=291, Percent_Identity=29.553264604811, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI11641269, Length=324, Percent_Identity=29.320987654321, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI193211608, Length=322, Percent_Identity=27.9503105590062, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI193211610, Length=322, Percent_Identity=27.9503105590062, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI221475880, Length=309, Percent_Identity=32.3624595469256, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI281362638, Length=295, Percent_Identity=31.864406779661, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI281362636, Length=295, Percent_Identity=31.864406779661, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI161083233, Length=293, Percent_Identity=30.0341296928328, Blast_Score=142, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 34492; Mature: 34492
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00869 RENAL_DIPEPTIDASE ; PS00148 ARGINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVDAHCDTLTVLTPQGRDLGTLSQRGHIDIPRLYRGGINVQFFAIFIGPDNYHDPAQY CEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHH TKEILKLFNKEIQRNASSLLHARNYADIVHAYDSKKICAVLTIEGGEALKGKIEQLESYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH TQGIRGLTLTWNGRNELGDGVGLGPEASGLTVFGRQVIQKMVELGMMIDVSHLSEAGFWD HCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHCCCCHHH VISEIRAPITASHANSRFICDHPRNLTDQQIRVISESGGVIGVTYVPQFIDLSKPSIERL HHHHHCCCEEECCCCCEEEECCCCCCCHHHHEEEECCCCEEEEEECCHHHCCCCHHHHHH IEHIDHIYEVGGISCIGLGSDFDGIDATVEGLHDASIAVPNLENALIKKGYTTGEIEKIM HHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCCEEECCCHHHHHHHCCCCHHHHHHHH GENWLRVFKEVCG HHHHHHHHHHHCC >Mature Secondary Structure MLIVDAHCDTLTVLTPQGRDLGTLSQRGHIDIPRLYRGGINVQFFAIFIGPDNYHDPAQY CEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHH TKEILKLFNKEIQRNASSLLHARNYADIVHAYDSKKICAVLTIEGGEALKGKIEQLESYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH TQGIRGLTLTWNGRNELGDGVGLGPEASGLTVFGRQVIQKMVELGMMIDVSHLSEAGFWD HCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHCCCCHHH VISEIRAPITASHANSRFICDHPRNLTDQQIRVISESGGVIGVTYVPQFIDLSKPSIERL HHHHHCCCEEECCCCCEEEECCCCCCCHHHHEEEECCCCEEEEEECCHHHCCCCHHHHHH IEHIDHIYEVGGISCIGLGSDFDGIDATVEGLHDASIAVPNLENALIKKGYTTGEIEKIM HHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCCEEECCCHHHHHHHCCCCHHHHHHHH GENWLRVFKEVCG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]