| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is mutL
Identifier: 134299735
GI number: 134299735
Start: 2067779
End: 2069701
Strand: Reverse
Name: mutL
Synonym: Dred_1884
Alternate gene names: 134299735
Gene position: 2069701-2067779 (Counterclockwise)
Preceding gene: 134299736
Following gene: 134299734
Centisome position: 57.36
GC content: 45.29
Gene sequence:
>1923_bases TTGTCAAACATTACTATATTGGATGAAGCCACGGCTAACAAAATAGCAGCTGGAGAAGTGGTGGAACGTCCGGTTTCTGT TGTTAAAGAATTAGTGGAAAACAGCTTGGATGCCGGTGCCAATAGAATAAGTGTTGAGTTAACACAGGGTGGCATAACTG GCATTAAAGTGGTGGATAATGGCTACGGAATGCCAGCAGAGGATGTTCAGCTTTGCTTTCTGCGCCATGCCACTAGTAAA ATAAAAAGGGCAGAGGATTTAAATAGTATTTTAACCTTAGGGTTTCGAGGAGAAGCACTACCCAGTATTGCTGCAGTCTC TAAGGTAACCCTAACCACTCGAACAGAAGATGAACTGGCCGGTACAACCATGCAAATTGAAGGTGGCTATATGCAAAATG TTGTGCCAACGGGGTGTCCCGTTGGCACAATCATTGAGATAAAGGATTTATTTTTTAATACTCCGGCCAGAAGAAAGTTC CTTAAAACAGCCAATGCAGAGACCAGTCAGGTAAGTGATTTAATAACCAGGCTGGCCATGGCTCGTCCAGACGTTCGTTT TGAATTACGCAGCGGTAACAGGGTGCTATTCTCAAGTCCGGGCACCGGGTCGTTAAAAGACACGGCGGCGGTGATCTTTG GGCTGGATAATGTGAGAAGCATGTTGGAGATAGGCTATCAGGGGAAACTGCTTTCAGTAGCTGGACTGATTTCAAAACCT GTTCTAACTAGAGCCTCCCGGCATTATCAAAATTTCTTTATCAATGGACGATATATTCGAAGTGGTTTTCTTTCCTCTAT ATTACAGCAGGCCTACGATACCTTGATTCCCGCGGGGCGTTTTCCCATTGCCATATTACACATAGATATTGATCCTACCC AGGTTGATGTCAATGTACATCCTACCAAAATGGAGATTCGTATGGCAAGGGAAGGGGAGATTCAGGAAGAGTTGTTGGCA GCCCTCAGTGACTCCCTCAATGTACCGACAGCTATTACCGGGTTATGGGAAATCATGCCCGGCAGGACAAAGAACACAGC AACGGATCAAAGGGCAGAAAATCTGGAGGTTAAACCGGATAGTAAGGAAAAGGAACTTCAACCAAAAGAGTCCCAGCATC CAAGATTGGTTGCCTGTGATTTACCCAGCGGCAAAATAATGCCCCCCCGGCATGACCAGGAACAGCTTCATTTTTCTTCC CGAAGGATTGCTCCTGTCAGGGGAAAAAATAGCCTTCTACCCGATGAAGGAAGTTCTATCAATAGAGAAGAGATCCCTCC GGTAGTGGATGTTAAAGAACAGCAATTGAAAGAAAACCCGAACACTTACCAACCCGCAGAGACACTGGGTTTTCCTGTCT TAGTACCCGCTGGTCAGGTACCGCCAACCTATGTTTTAGCCCACGGAGAAGGTGGCTTGTATATCATTGATCAGCATGCG GCACATGAACGGGTGCTTTACGAGAAATATCTTTATCTTTTAGGCAATTATGTAGAAGCGCAAATGCTTCTGGAACCCCT GACCCTTGAAATTCCCCATCATGAGGCTCAATTGATTATCAAGCATATTGTGGACTTTAATGAACTTGGCTTTATACTGG AGCACTTTGGTGGAGATACTTTTTTGTTGAGGGGTGTTCCCACAAACGCTATAACAGAACCCAAAGAGGTATTTTTGGAC TTGTTGGCAAGATTGCAAGAAAATCCTTCCCAAAAAGTCGAAAAGAATCTGGTTTTGGATCATCTGGCAGCAGCCATGGC CTGTCGGGATGCGGTTAAGTCCGGACAGCACTTTAGTGCTGTCGAAACGAAAGCGTTGCTGGATGGCTTGGCGAGGTGTC AAAAGCCCTATACTTGTCCCCATGGTAGACCAACTTTGATTCAGATTAGTCAAGAGGAGTTGAAGAAAAGGTTCAAACGA TGA
Upstream 100 bases:
>100_bases TTTGATTACATTTATCTGCAAGATAAATCTACTGATACCTTTATGATTTATCAACGGCTGGGCAACAGAGAAATACGCTC AGACGGTTAGGGGTGACAAC
Downstream 100 bases:
>100_bases ATGATTCCCTTGTTATCACCACTGGAATTAGAAGCAGGAAAAACCTGGAGGAAAAGGCCCTGGAATTAAGTAGAGAGTGG AAGATACCCTATCAACCAAG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MSNITILDEATANKIAAGEVVERPVSVVKELVENSLDAGANRISVELTQGGITGIKVVDNGYGMPAEDVQLCFLRHATSK IKRAEDLNSILTLGFRGEALPSIAAVSKVTLTTRTEDELAGTTMQIEGGYMQNVVPTGCPVGTIIEIKDLFFNTPARRKF LKTANAETSQVSDLITRLAMARPDVRFELRSGNRVLFSSPGTGSLKDTAAVIFGLDNVRSMLEIGYQGKLLSVAGLISKP VLTRASRHYQNFFINGRYIRSGFLSSILQQAYDTLIPAGRFPIAILHIDIDPTQVDVNVHPTKMEIRMAREGEIQEELLA ALSDSLNVPTAITGLWEIMPGRTKNTATDQRAENLEVKPDSKEKELQPKESQHPRLVACDLPSGKIMPPRHDQEQLHFSS RRIAPVRGKNSLLPDEGSSINREEIPPVVDVKEQQLKENPNTYQPAETLGFPVLVPAGQVPPTYVLAHGEGGLYIIDQHA AHERVLYEKYLYLLGNYVEAQMLLEPLTLEIPHHEAQLIIKHIVDFNELGFILEHFGGDTFLLRGVPTNAITEPKEVFLD LLARLQENPSQKVEKNLVLDHLAAAMACRDAVKSGQHFSAVETKALLDGLARCQKPYTCPHGRPTLIQISQEELKKRFKR
Sequences:
>Translated_640_residues MSNITILDEATANKIAAGEVVERPVSVVKELVENSLDAGANRISVELTQGGITGIKVVDNGYGMPAEDVQLCFLRHATSK IKRAEDLNSILTLGFRGEALPSIAAVSKVTLTTRTEDELAGTTMQIEGGYMQNVVPTGCPVGTIIEIKDLFFNTPARRKF LKTANAETSQVSDLITRLAMARPDVRFELRSGNRVLFSSPGTGSLKDTAAVIFGLDNVRSMLEIGYQGKLLSVAGLISKP VLTRASRHYQNFFINGRYIRSGFLSSILQQAYDTLIPAGRFPIAILHIDIDPTQVDVNVHPTKMEIRMAREGEIQEELLA ALSDSLNVPTAITGLWEIMPGRTKNTATDQRAENLEVKPDSKEKELQPKESQHPRLVACDLPSGKIMPPRHDQEQLHFSS RRIAPVRGKNSLLPDEGSSINREEIPPVVDVKEQQLKENPNTYQPAETLGFPVLVPAGQVPPTYVLAHGEGGLYIIDQHA AHERVLYEKYLYLLGNYVEAQMLLEPLTLEIPHHEAQLIIKHIVDFNELGFILEHFGGDTFLLRGVPTNAITEPKEVFLD LLARLQENPSQKVEKNLVLDHLAAAMACRDAVKSGQHFSAVETKALLDGLARCQKPYTCPHGRPTLIQISQEELKKRFKR >Mature_639_residues SNITILDEATANKIAAGEVVERPVSVVKELVENSLDAGANRISVELTQGGITGIKVVDNGYGMPAEDVQLCFLRHATSKI KRAEDLNSILTLGFRGEALPSIAAVSKVTLTTRTEDELAGTTMQIEGGYMQNVVPTGCPVGTIIEIKDLFFNTPARRKFL KTANAETSQVSDLITRLAMARPDVRFELRSGNRVLFSSPGTGSLKDTAAVIFGLDNVRSMLEIGYQGKLLSVAGLISKPV LTRASRHYQNFFINGRYIRSGFLSSILQQAYDTLIPAGRFPIAILHIDIDPTQVDVNVHPTKMEIRMAREGEIQEELLAA LSDSLNVPTAITGLWEIMPGRTKNTATDQRAENLEVKPDSKEKELQPKESQHPRLVACDLPSGKIMPPRHDQEQLHFSSR RIAPVRGKNSLLPDEGSSINREEIPPVVDVKEQQLKENPNTYQPAETLGFPVLVPAGQVPPTYVLAHGEGGLYIIDQHAA HERVLYEKYLYLLGNYVEAQMLLEPLTLEIPHHEAQLIIKHIVDFNELGFILEHFGGDTFLLRGVPTNAITEPKEVFLDL LARLQENPSQKVEKNLVLDHLAAAMACRDAVKSGQHFSAVETKALLDGLARCQKPYTCPHGRPTLIQISQEELKKRFKR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=318, Percent_Identity=35.5345911949685, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI310128478, Length=350, Percent_Identity=30.8571428571429, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI4505911, Length=329, Percent_Identity=30.6990881458967, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI4505913, Length=350, Percent_Identity=30.8571428571429, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI189458898, Length=329, Percent_Identity=30.6990881458967, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI189458896, Length=322, Percent_Identity=30.4347826086957, Blast_Score=134, Evalue=4e-31, Organism=Homo sapiens, GI310128480, Length=307, Percent_Identity=28.6644951140065, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI91992162, Length=263, Percent_Identity=28.5171102661597, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI263191589, Length=227, Percent_Identity=30.3964757709251, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI91992160, Length=253, Percent_Identity=28.8537549407115, Blast_Score=97, Evalue=4e-20, Organism=Escherichia coli, GI1790612, Length=310, Percent_Identity=43.2258064516129, Blast_Score=246, Evalue=3e-66, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=37.5, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17562796, Length=355, Percent_Identity=26.1971830985915, Blast_Score=121, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6323819, Length=461, Percent_Identity=31.8872017353579, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6324247, Length=358, Percent_Identity=26.2569832402235, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6325093, Length=310, Percent_Identity=26.1290322580645, Blast_Score=84, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6323063, Length=184, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17136968, Length=315, Percent_Identity=35.5555555555556, Blast_Score=195, Evalue=8e-50, Organism=Drosophila melanogaster, GI17136970, Length=355, Percent_Identity=25.0704225352113, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_DESRM (A4J5Q3)
Other databases:
- EMBL: CP000612 - RefSeq: YP_001113231.1 - ProteinModelPortal: A4J5Q3 - SMR: A4J5Q3 - STRING: A4J5Q3 - GeneID: 4958264 - GenomeReviews: CP000612_GR - KEGG: drm:Dred_1884 - eggNOG: COG0323 - HOGENOM: HBG520262 - OMA: MACKAAV - PhylomeDB: A4J5Q3 - ProtClustDB: PRK00095 - BioCyc: DRED349161:DRED_1884-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 70736; Mature: 70605
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNITILDEATANKIAAGEVVERPVSVVKELVENSLDAGANRISVELTQGGITGIKVVDN CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEC GYGMPAEDVQLCFLRHATSKIKRAEDLNSILTLGFRGEALPSIAAVSKVTLTTRTEDELA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHEEEEEECCCHHHC GTTMQIEGGYMQNVVPTGCPVGTIIEIKDLFFNTPARRKFLKTANAETSQVSDLITRLAM CCEEEECCCHHHCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH ARPDVRFELRSGNRVLFSSPGTGSLKDTAAVIFGLDNVRSMLEIGYQGKLLSVAGLISKP CCCCCEEEECCCCEEEEECCCCCCCHHHHEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHH VLTRASRHYQNFFINGRYIRSGFLSSILQQAYDTLIPAGRFPIAILHIDIDPTQVDVNVH HHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEC PTKMEIRMAREGEIQEELLAALSDSLNVPTAITGLWEIMPGRTKNTATDQRAENLEVKPD CCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC SKEKELQPKESQHPRLVACDLPSGKIMPPRHDQEQLHFSSRRIAPVRGKNSLLPDEGSSI CCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC NREEIPPVVDVKEQQLKENPNTYQPAETLGFPVLVPAGQVPPTYVLAHGEGGLYIIDQHA CHHHCCCCCCCCHHHHHCCCCCCCCHHHCCCEEEECCCCCCCCEEEEECCCCEEEEECCC AHERVLYEKYLYLLGNYVEAQMLLEPLTLEIPHHEAQLIIKHIVDFNELGFILEHFGGDT HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCHHHHHHHHHHCCCCE FLLRGVPTNAITEPKEVFLDLLARLQENPSQKVEKNLVLDHLAAAMACRDAVKSGQHFSA EEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VETKALLDGLARCQKPYTCPHGRPTLIQISQEELKKRFKR HHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHCC >Mature Secondary Structure SNITILDEATANKIAAGEVVERPVSVVKELVENSLDAGANRISVELTQGGITGIKVVDN CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEC GYGMPAEDVQLCFLRHATSKIKRAEDLNSILTLGFRGEALPSIAAVSKVTLTTRTEDELA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHEEEEEECCCHHHC GTTMQIEGGYMQNVVPTGCPVGTIIEIKDLFFNTPARRKFLKTANAETSQVSDLITRLAM CCEEEECCCHHHCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH ARPDVRFELRSGNRVLFSSPGTGSLKDTAAVIFGLDNVRSMLEIGYQGKLLSVAGLISKP CCCCCEEEECCCCEEEEECCCCCCCHHHHEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHH VLTRASRHYQNFFINGRYIRSGFLSSILQQAYDTLIPAGRFPIAILHIDIDPTQVDVNVH HHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEC PTKMEIRMAREGEIQEELLAALSDSLNVPTAITGLWEIMPGRTKNTATDQRAENLEVKPD CCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC SKEKELQPKESQHPRLVACDLPSGKIMPPRHDQEQLHFSSRRIAPVRGKNSLLPDEGSSI CCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC NREEIPPVVDVKEQQLKENPNTYQPAETLGFPVLVPAGQVPPTYVLAHGEGGLYIIDQHA CHHHCCCCCCCCHHHHHCCCCCCCCHHHCCCEEEECCCCCCCCEEEEECCCCEEEEECCC AHERVLYEKYLYLLGNYVEAQMLLEPLTLEIPHHEAQLIIKHIVDFNELGFILEHFGGDT HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCHHHHHHHHHHCCCCE FLLRGVPTNAITEPKEVFLDLLARLQENPSQKVEKNLVLDHLAAAMACRDAVKSGQHFSA EEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VETKALLDGLARCQKPYTCPHGRPTLIQISQEELKKRFKR HHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA