Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is ypiP [H]

Identifier: 134299734

GI number: 134299734

Start: 2066985

End: 2067782

Strand: Reverse

Name: ypiP [H]

Synonym: Dred_1883

Alternate gene names: 134299734

Gene position: 2067782-2066985 (Counterclockwise)

Preceding gene: 134299735

Following gene: 134299733

Centisome position: 57.31

GC content: 43.73

Gene sequence:

>798_bases
ATGAATGATTCCCTTGTTATCACCACTGGAATTAGAAGCAGGAAAAACCTGGAGGAAAAGGCCCTGGAATTAAGTAGAGA
GTGGAAGATACCCTATCAACCAAGGGAGAAATATTCACTGGATTTCATTAGAGAAATGACAGGTGCTTCCACTATATTAT
TGGTCAGCCACCAGAAACTTTCTTTAGTTACCAATGGAAAAGAATTCTTTTTTCATCCAGGATTAGCTAAATTACGTATA
AAGGAACTACAGGCTGGGAAAACTGACCAAATGATAAAAGCAATGGACCTCCAGGAAGGAGACTCCCTGTTGGATTGTAC
CCTGGGATTGGCTGCTGATGCCTTGGTGGCCAGTTATGTGGTGGGAACCAAGGGTATCATTGTAGGGTTAGAGGATGCTG
CTCCAGTGGCGCATATTATTGCTCGGGGCCTTAGAAGTTATACCGGTGAAAAGCCGGAATTGATAAATGCTATGCGTAGG
ATACAGGTGGTTAACCAACATCATTTGCATTATCTTCGCAATCTACCCAGCAACACCTTTGATGTTGTTTATTTTGATCC
TATGTTCAGGGTACCAAAGGTTAAATCAAGTTCGATGGCTCCATTACGAGATCTGGCCAATAGCAGTCCTTTGTCCATTG
AAGCTGTGGCAGAGGCAGTCCGAGTGGCTAGGAAGAGGGTGGTCATGAAGGAGAACAGAGAAAGCCAAGAATTTCAACGA
CTAAACTTTCAACTGATCCAGGGGGGAAGATATTCCCCGGTGGCCTACGGTGTAATAAAAGGCGGTGTTTTAAAATAG

Upstream 100 bases:

>100_bases
TGGATGGCTTGGCGAGGTGTCAAAAGCCCTATACTTGTCCCCATGGTAGACCAACTTTGATTCAGATTAGTCAAGAGGAG
TTGAAGAAAAGGTTCAAACG

Downstream 100 bases:

>100_bases
AAGCATTAAAGCCGTTAATAGCCATTGTAGGGCCTACGGCTTCTGGCAAAACTAATGTAGCTATAGAACTAGCTAAAAGA
GTAAAGGGGGAAGTGATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKLSLVTNGKEFFFHPGLAKLRI
KELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYVVGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRR
IQVVNQHHLHYLRNLPSNTFDVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR
LNFQLIQGGRYSPVAYGVIKGGVLK

Sequences:

>Translated_265_residues
MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKLSLVTNGKEFFFHPGLAKLRI
KELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYVVGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRR
IQVVNQHHLHYLRNLPSNTFDVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR
LNFQLIQGGRYSPVAYGVIKGGVLK
>Mature_265_residues
MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKLSLVTNGKEFFFHPGLAKLRI
KELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYVVGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRR
IQVVNQHHLHYLRNLPSNTFDVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR
LNFQLIQGGRYSPVAYGVIKGGVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004154
- InterPro:   IPR007536 [H]

Pfam domain/function: PF04445 DUF548 [H]

EC number: NA

Molecular weight: Translated: 29679; Mature: 29679

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKL
CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEE
SLVTNGKEFFFHPGLAKLRIKELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYV
EEEECCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRRIQVVNQHHLHYLRNLPSNTF
HCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
DVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR
EEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LNFQLIQGGRYSPVAYGVIKGGVLK
HCHHEECCCCCCCEEHHHHCCCCCC
>Mature Secondary Structure
MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKL
CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEE
SLVTNGKEFFFHPGLAKLRIKELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYV
EEEECCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRRIQVVNQHHLHYLRNLPSNTF
HCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
DVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR
EEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LNFQLIQGGRYSPVAYGVIKGGVLK
HCHHEECCCCCCCEEHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]