| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is ypiP [H]
Identifier: 134299734
GI number: 134299734
Start: 2066985
End: 2067782
Strand: Reverse
Name: ypiP [H]
Synonym: Dred_1883
Alternate gene names: 134299734
Gene position: 2067782-2066985 (Counterclockwise)
Preceding gene: 134299735
Following gene: 134299733
Centisome position: 57.31
GC content: 43.73
Gene sequence:
>798_bases ATGAATGATTCCCTTGTTATCACCACTGGAATTAGAAGCAGGAAAAACCTGGAGGAAAAGGCCCTGGAATTAAGTAGAGA GTGGAAGATACCCTATCAACCAAGGGAGAAATATTCACTGGATTTCATTAGAGAAATGACAGGTGCTTCCACTATATTAT TGGTCAGCCACCAGAAACTTTCTTTAGTTACCAATGGAAAAGAATTCTTTTTTCATCCAGGATTAGCTAAATTACGTATA AAGGAACTACAGGCTGGGAAAACTGACCAAATGATAAAAGCAATGGACCTCCAGGAAGGAGACTCCCTGTTGGATTGTAC CCTGGGATTGGCTGCTGATGCCTTGGTGGCCAGTTATGTGGTGGGAACCAAGGGTATCATTGTAGGGTTAGAGGATGCTG CTCCAGTGGCGCATATTATTGCTCGGGGCCTTAGAAGTTATACCGGTGAAAAGCCGGAATTGATAAATGCTATGCGTAGG ATACAGGTGGTTAACCAACATCATTTGCATTATCTTCGCAATCTACCCAGCAACACCTTTGATGTTGTTTATTTTGATCC TATGTTCAGGGTACCAAAGGTTAAATCAAGTTCGATGGCTCCATTACGAGATCTGGCCAATAGCAGTCCTTTGTCCATTG AAGCTGTGGCAGAGGCAGTCCGAGTGGCTAGGAAGAGGGTGGTCATGAAGGAGAACAGAGAAAGCCAAGAATTTCAACGA CTAAACTTTCAACTGATCCAGGGGGGAAGATATTCCCCGGTGGCCTACGGTGTAATAAAAGGCGGTGTTTTAAAATAG
Upstream 100 bases:
>100_bases TGGATGGCTTGGCGAGGTGTCAAAAGCCCTATACTTGTCCCCATGGTAGACCAACTTTGATTCAGATTAGTCAAGAGGAG TTGAAGAAAAGGTTCAAACG
Downstream 100 bases:
>100_bases AAGCATTAAAGCCGTTAATAGCCATTGTAGGGCCTACGGCTTCTGGCAAAACTAATGTAGCTATAGAACTAGCTAAAAGA GTAAAGGGGGAAGTGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKLSLVTNGKEFFFHPGLAKLRI KELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYVVGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRR IQVVNQHHLHYLRNLPSNTFDVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR LNFQLIQGGRYSPVAYGVIKGGVLK
Sequences:
>Translated_265_residues MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKLSLVTNGKEFFFHPGLAKLRI KELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYVVGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRR IQVVNQHHLHYLRNLPSNTFDVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR LNFQLIQGGRYSPVAYGVIKGGVLK >Mature_265_residues MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKLSLVTNGKEFFFHPGLAKLRI KELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYVVGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRR IQVVNQHHLHYLRNLPSNTFDVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR LNFQLIQGGRYSPVAYGVIKGGVLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004154 - InterPro: IPR007536 [H]
Pfam domain/function: PF04445 DUF548 [H]
EC number: NA
Molecular weight: Translated: 29679; Mature: 29679
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKL CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEE SLVTNGKEFFFHPGLAKLRIKELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYV EEEECCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRRIQVVNQHHLHYLRNLPSNTF HCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE DVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR EEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH LNFQLIQGGRYSPVAYGVIKGGVLK HCHHEECCCCCCCEEHHHHCCCCCC >Mature Secondary Structure MNDSLVITTGIRSRKNLEEKALELSREWKIPYQPREKYSLDFIREMTGASTILLVSHQKL CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEE SLVTNGKEFFFHPGLAKLRIKELQAGKTDQMIKAMDLQEGDSLLDCTLGLAADALVASYV EEEECCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VGTKGIIVGLEDAAPVAHIIARGLRSYTGEKPELINAMRRIQVVNQHHLHYLRNLPSNTF HCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE DVVYFDPMFRVPKVKSSSMAPLRDLANSSPLSIEAVAEAVRVARKRVVMKENRESQEFQR EEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH LNFQLIQGGRYSPVAYGVIKGGVLK HCHHEECCCCCCCEEHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]