| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299111
Identifier: 134299111
GI number: 134299111
Start: 1320383
End: 1320847
Strand: Reverse
Name: 134299111
Synonym: Dred_1248
Alternate gene names: NA
Gene position: 1320847-1320383 (Counterclockwise)
Preceding gene: 134299113
Following gene: 134299108
Centisome position: 36.61
GC content: 37.2
Gene sequence:
>465_bases ATGACATGGGTTTTCTTTACAATCTTTTGTTGGCTTCTGGCCCTTATACTTGTGCGTCAACCGGGAATTAAAGAATACTG GCCCTCTGCTTTAATTAGCTTAACTGTAGTATATTTAGTTGATAGCACCGGGACATACTATGGTGCATATCGTTTTTTAA ATACACCCCTCATTAACGGCGTACCTATTCTTTATTTAATATCCTCTTTGGCCCTTGGAATGGTAACCTTACGGTTTTAT CCCCGGGAGCATCGTGAACAGTTGATTTATATTGCAGTATTAGCTGCTCTTTTTTTAATGGCTGAAATAATTCTTATGAA AACAGGTAACTTTATTCATCTAAAAGGCTGGCATTTAGGTAAAAGTTATATCCTCAATATTTTAGGTTTTATTATTATAA CTTGGATTTCTACCAGATTTGGTATACGGGGTGCTGCCTTTCATTGGCCCTTTGCCCTTCGATAG
Upstream 100 bases:
>100_bases AAAATGGAACTTTGGCTTTTTACTCTCTTAACAATTGCCATAGGGTTAGTAACAACCGGCTGGTTTTTATTAATATCCCA TATAGATAGGAGGTAAAGGA
Downstream 100 bases:
>100_bases TAACATTAAAATTGAAGAGTTAGCCAAGGCTAACTCTTCAATTTAGCTAATATTTTTGTTACTGTAAAGGGCTTATTCTC AATTGCAACAATTTCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLINGVPILYLISSLALGMVTLRFY PREHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLGKSYILNILGFIIITWISTRFGIRGAAFHWPFALR
Sequences:
>Translated_154_residues MTWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLINGVPILYLISSLALGMVTLRFY PREHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLGKSYILNILGFIIITWISTRFGIRGAAFHWPFALR >Mature_153_residues TWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLINGVPILYLISSLALGMVTLRFYP REHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLGKSYILNILGFIIITWISTRFGIRGAAFHWPFALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17778; Mature: 17646
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLING CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCC VPILYLISSLALGMVTLRFYPREHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLG CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC KSYILNILGFIIITWISTRFGIRGAAFHWPFALR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLING HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCC VPILYLISSLALGMVTLRFYPREHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLG CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC KSYILNILGFIIITWISTRFGIRGAAFHWPFALR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA