Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is 134299111

Identifier: 134299111

GI number: 134299111

Start: 1320383

End: 1320847

Strand: Reverse

Name: 134299111

Synonym: Dred_1248

Alternate gene names: NA

Gene position: 1320847-1320383 (Counterclockwise)

Preceding gene: 134299113

Following gene: 134299108

Centisome position: 36.61

GC content: 37.2

Gene sequence:

>465_bases
ATGACATGGGTTTTCTTTACAATCTTTTGTTGGCTTCTGGCCCTTATACTTGTGCGTCAACCGGGAATTAAAGAATACTG
GCCCTCTGCTTTAATTAGCTTAACTGTAGTATATTTAGTTGATAGCACCGGGACATACTATGGTGCATATCGTTTTTTAA
ATACACCCCTCATTAACGGCGTACCTATTCTTTATTTAATATCCTCTTTGGCCCTTGGAATGGTAACCTTACGGTTTTAT
CCCCGGGAGCATCGTGAACAGTTGATTTATATTGCAGTATTAGCTGCTCTTTTTTTAATGGCTGAAATAATTCTTATGAA
AACAGGTAACTTTATTCATCTAAAAGGCTGGCATTTAGGTAAAAGTTATATCCTCAATATTTTAGGTTTTATTATTATAA
CTTGGATTTCTACCAGATTTGGTATACGGGGTGCTGCCTTTCATTGGCCCTTTGCCCTTCGATAG

Upstream 100 bases:

>100_bases
AAAATGGAACTTTGGCTTTTTACTCTCTTAACAATTGCCATAGGGTTAGTAACAACCGGCTGGTTTTTATTAATATCCCA
TATAGATAGGAGGTAAAGGA

Downstream 100 bases:

>100_bases
TAACATTAAAATTGAAGAGTTAGCCAAGGCTAACTCTTCAATTTAGCTAATATTTTTGTTACTGTAAAGGGCTTATTCTC
AATTGCAACAATTTCCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLINGVPILYLISSLALGMVTLRFY
PREHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLGKSYILNILGFIIITWISTRFGIRGAAFHWPFALR

Sequences:

>Translated_154_residues
MTWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLINGVPILYLISSLALGMVTLRFY
PREHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLGKSYILNILGFIIITWISTRFGIRGAAFHWPFALR
>Mature_153_residues
TWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLINGVPILYLISSLALGMVTLRFYP
REHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLGKSYILNILGFIIITWISTRFGIRGAAFHWPFALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17778; Mature: 17646

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLING
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCC
VPILYLISSLALGMVTLRFYPREHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLG
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
KSYILNILGFIIITWISTRFGIRGAAFHWPFALR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TWVFFTIFCWLLALILVRQPGIKEYWPSALISLTVVYLVDSTGTYYGAYRFLNTPLING
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCC
VPILYLISSLALGMVTLRFYPREHREQLIYIAVLAALFLMAEIILMKTGNFIHLKGWHLG
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
KSYILNILGFIIITWISTRFGIRGAAFHWPFALR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA