| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299108
Identifier: 134299108
GI number: 134299108
Start: 1318745
End: 1319797
Strand: Reverse
Name: 134299108
Synonym: Dred_1245
Alternate gene names: NA
Gene position: 1319797-1318745 (Counterclockwise)
Preceding gene: 134299111
Following gene: 134299107
Centisome position: 36.58
GC content: 41.12
Gene sequence:
>1053_bases ATGAGAGTAGCTATCATCGGGGCAGGCATTACCGGACTTGCTTGTGCCATCGAACTTGAAAAATATGGTATCAGACCAGT AATATTTGAAAAAAATCATCGTATTGGCAGCCCATTTCCCTACGCCCCCTTATTATTAGATTTTATTTTTCGGCCTATTA AAAGACCACTACATACCCTAAAGACTCAATATAATATTAAATTAAAGCCGATCAGTGATATACGTTTTATGCGGGTCCAA GGACCTCAGGCTCAGTTTTCTACGGGAGGCAACCTTGGATACAGCCTATTGCAGGGTCAGGAGATTCACTCCATTGAATC CCAAATGGCAAGCCATTTAAAAACGTCAATTCAATTTGAAACCCCCGTCAAACCAGAGGATATTCTAAAGCAATACGATT ATGTTGTTGTGGCAACCGGAAATAAAGAGTATGCCCATCAATTAGGAATATGGCAAAATACTTATCAATCCTGGGTTAGG GGTGCTACCATTCTAGGTCGTTTTAACCCCCAGGAGATAAGGTTCTGGTTTAATAAGAATTATACTAAGGGTGGCTATGC TTATATGGTACCGATGGGAATAGAAAGAGCCACTTTAATGCTAAGTGTAGCCGATACAACACAGGATAAGCTCGCAGAGT TTTGGCAGAAATTCATTGACCAGGAAAAGCTTGACCCGGAGATTGTTTTACTCTGGGATGTAGCCTTCAACACCGGTGAA GTTTTTCCTCACCGAGTAGGTAATACTTTCTTTGTGGGAAATAGCGGCGGCTTTGTTACCAGTTGGCTGGGAGAAGGAAC CTTTTCAAGTATTATGAGCGGTATAGAGGCTGCCCGTTCCATTGCTACAGGCTGCCCGTTCGAGAAAAGAATGAAGGAAA TAACTCAAATAATGGAAAGACAAGCACGTTTCCGGTCTCTATGGGATAAATTTGATAACAAAGGTATCGATCGGGCTATC AGACTAATGGGTAGTCCTCTGATTCAATACCCTTTATACCATACAAATCTTAATTTTTTTAAAGCCATCGATCATTTCAA CGACCGTTATTAA
Upstream 100 bases:
>100_bases CCGCCTTTATATTCATCTCTTTTACATTGTGTAATTTTAGGCATATTATTATACCTTTGGCAGAAAATATTAATTAATAT TAATGTAACTGGAGGAAATC
Downstream 100 bases:
>100_bases AATAATTATTACAAGAAAAAGTATCTTCATTTATATTTTATTTTAAATAAAAAAGTTTTTTAGGATTTTCCGTTAATTAA CAGACCTATGTCTTATACCT
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Dehydrogenase; FAD Dependent Dehydrogenase; FAD-Dependent Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Dehydrogenase
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRVAIIGAGITGLACAIELEKYGIRPVIFEKNHRIGSPFPYAPLLLDFIFRPIKRPLHTLKTQYNIKLKPISDIRFMRVQ GPQAQFSTGGNLGYSLLQGQEIHSIESQMASHLKTSIQFETPVKPEDILKQYDYVVVATGNKEYAHQLGIWQNTYQSWVR GATILGRFNPQEIRFWFNKNYTKGGYAYMVPMGIERATLMLSVADTTQDKLAEFWQKFIDQEKLDPEIVLLWDVAFNTGE VFPHRVGNTFFVGNSGGFVTSWLGEGTFSSIMSGIEAARSIATGCPFEKRMKEITQIMERQARFRSLWDKFDNKGIDRAI RLMGSPLIQYPLYHTNLNFFKAIDHFNDRY
Sequences:
>Translated_350_residues MRVAIIGAGITGLACAIELEKYGIRPVIFEKNHRIGSPFPYAPLLLDFIFRPIKRPLHTLKTQYNIKLKPISDIRFMRVQ GPQAQFSTGGNLGYSLLQGQEIHSIESQMASHLKTSIQFETPVKPEDILKQYDYVVVATGNKEYAHQLGIWQNTYQSWVR GATILGRFNPQEIRFWFNKNYTKGGYAYMVPMGIERATLMLSVADTTQDKLAEFWQKFIDQEKLDPEIVLLWDVAFNTGE VFPHRVGNTFFVGNSGGFVTSWLGEGTFSSIMSGIEAARSIATGCPFEKRMKEITQIMERQARFRSLWDKFDNKGIDRAI RLMGSPLIQYPLYHTNLNFFKAIDHFNDRY >Mature_350_residues MRVAIIGAGITGLACAIELEKYGIRPVIFEKNHRIGSPFPYAPLLLDFIFRPIKRPLHTLKTQYNIKLKPISDIRFMRVQ GPQAQFSTGGNLGYSLLQGQEIHSIESQMASHLKTSIQFETPVKPEDILKQYDYVVVATGNKEYAHQLGIWQNTYQSWVR GATILGRFNPQEIRFWFNKNYTKGGYAYMVPMGIERATLMLSVADTTQDKLAEFWQKFIDQEKLDPEIVLLWDVAFNTGE VFPHRVGNTFFVGNSGGFVTSWLGEGTFSSIMSGIEAARSIATGCPFEKRMKEITQIMERQARFRSLWDKFDNKGIDRAI RLMGSPLIQYPLYHTNLNFFKAIDHFNDRY
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40132; Mature: 40132
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAIIGAGITGLACAIELEKYGIRPVIFEKNHRIGSPFPYAPLLLDFIFRPIKRPLHTL CEEEEEECCHHHHHEEEEHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KTQYNIKLKPISDIRFMRVQGPQAQFSTGGNLGYSLLQGQEIHSIESQMASHLKTSIQFE HHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCEEEC TPVKPEDILKQYDYVVVATGNKEYAHQLGIWQNTYQSWVRGATILGRFNPQEIRFWFNKN CCCCHHHHHHHCCEEEEEECCHHHHHHHCCHHHHHHHHHCCHHEEECCCHHHEEEEECCC YTKGGYAYMVPMGIERATLMLSVADTTQDKLAEFWQKFIDQEKLDPEIVLLWDVAFNTGE CCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC VFPHRVGNTFFVGNSGGFVTSWLGEGTFSSIMSGIEAARSIATGCPFEKRMKEITQIMER CCHHHCCCEEEEECCCCEEEEHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QARFRSLWDKFDNKGIDRAIRLMGSPLIQYPLYHTNLNFFKAIDHFNDRY HHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCEEECCCHHHHHHHHCCCCC >Mature Secondary Structure MRVAIIGAGITGLACAIELEKYGIRPVIFEKNHRIGSPFPYAPLLLDFIFRPIKRPLHTL CEEEEEECCHHHHHEEEEHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KTQYNIKLKPISDIRFMRVQGPQAQFSTGGNLGYSLLQGQEIHSIESQMASHLKTSIQFE HHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCEEEC TPVKPEDILKQYDYVVVATGNKEYAHQLGIWQNTYQSWVRGATILGRFNPQEIRFWFNKN CCCCHHHHHHHCCEEEEEECCHHHHHHHCCHHHHHHHHHCCHHEEECCCHHHEEEEECCC YTKGGYAYMVPMGIERATLMLSVADTTQDKLAEFWQKFIDQEKLDPEIVLLWDVAFNTGE CCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC VFPHRVGNTFFVGNSGGFVTSWLGEGTFSSIMSGIEAARSIATGCPFEKRMKEITQIMER CCHHHCCCEEEEECCCCEEEEHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QARFRSLWDKFDNKGIDRAIRLMGSPLIQYPLYHTNLNFFKAIDHFNDRY HHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCEEECCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA