| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is ylaK [H]
Identifier: 134299113
GI number: 134299113
Start: 1321904
End: 1323217
Strand: Reverse
Name: ylaK [H]
Synonym: Dred_1250
Alternate gene names: 134299113
Gene position: 1323217-1321904 (Counterclockwise)
Preceding gene: 134299114
Following gene: 134299111
Centisome position: 36.67
GC content: 40.72
Gene sequence:
>1314_bases GTGCATATTAGGATCCTTGATACTAATGTTTTATTGGACCGGCCTATCAATGAAATTATCGTATCCCTGGAACCCTGTAA GATTGTTATCCCCCTTGCAGTTGTAAACGAACTGGACCGCTTTAAAGGCTTAGAGGATGCCCGGGGCCATTGCGCTCGTC AAGCAATCCGTTTTTTAGACAGTCTAAGACCCCATTTGCACCAAGGTGTTTCACTTCCCAGTGGGCATCAAATCCTAGTG GAAGTAAATCATTGTAATGTACCATTACCAGAGTATTTACCCAAAGAAAAGGTAGACACACGAATTCTGGCCATTGCCAA GGGCTTCAAAGAAGAACAACATTATCCCGTAACTCTTATCACCCAAGACATTTGTCAACGTGTTATTGCGGACACACTAG GTGTTTCAGCGGAAAACTATGCTGCAGAGCAAGTAAATTTGGATTTATTATACAGAGGCTGGGATACCATAAACGTTTCA TACGAAGAGGTACAGGATTTTTACCAACTCAGACACATTGCAACAAATAAGGATCTATTAGAAAATCAATTTATATGCAT GGAAGACAGCCTTGGCGGTCGTCATTTGGGACGATACCGTAAGGGCTTTATTCACCCTCTCCGTAGAGAACTTCATGCCT TTGGTTTAGGTCCAGCAGAAGGAAACCTTGAGCAATCTTTCTTAATGGATGCATTATTGGATCCTAATATTGAATTAGTT AGTATCTTAGGACCCGCTGGAACCGGTAAAACACTTTTGGCATTGGCAGCGGGATTACAACAGGTTGTAAATCAAAGGCT TTATTCTAAATTAATTGTTACCAGGGCATTAATTCCCCATAGTCGAGATATTGGTGCTTTACCAGGTACAAAAAAAGAAA AATTGACCCCATGGATGGCCGCAATCTATGATAACTTAGAATTTCTAACCCAGAATTTTGTTTCATCAAAACACGAAGAG AGATGTTCAACCGCCGAACGTGTGGAAAGATTTATGGAAGAGGGATTTATTGAGTTAGAGGCCCTAACTTATATTAGGGG TCGTTCAATTCCGAAACAATGGATTCTGATCGATGAAGCCCAAAACCTTACCAAAGAAAACATAAAAACAATTATAACCC GGGCAGGTATGGGTAGTAAAATTGTACTCACAGGAGATATTCAGCAAATTGATAATTACCGACTTACAGCTACCAGTAAT GGCTTTGTAACTTTAATCGATGCCTTTAAAAACCAGGATTTATATGCTCACATCTCTTTAAGCCGTACGGAACGAAGTCG TCTAGCTGCCCTAGGAGTGGACCTACTACCATAA
Upstream 100 bases:
>100_bases TAAGTTGTTAAAAGCTTAATTTTCTTTTACCCTTCTTTTATCGTGTCTTAATAATAAAGGTATACACTAAACAATAGATT AATAGCTAGGAGGGGAAATC
Downstream 100 bases:
>100_bases AAGAAGTGGTCCTTAACAAAAAATATCCCGTATCACCATAAAAGTGGTACGAGATTGCTTTATTTTTTTCGATTGATAAC GGTGGAGTTAAAATCTACAT
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MHIRILDTNVLLDRPINEIIVSLEPCKIVIPLAVVNELDRFKGLEDARGHCARQAIRFLDSLRPHLHQGVSLPSGHQILV EVNHCNVPLPEYLPKEKVDTRILAIAKGFKEEQHYPVTLITQDICQRVIADTLGVSAENYAAEQVNLDLLYRGWDTINVS YEEVQDFYQLRHIATNKDLLENQFICMEDSLGGRHLGRYRKGFIHPLRRELHAFGLGPAEGNLEQSFLMDALLDPNIELV SILGPAGTGKTLLALAAGLQQVVNQRLYSKLIVTRALIPHSRDIGALPGTKKEKLTPWMAAIYDNLEFLTQNFVSSKHEE RCSTAERVERFMEEGFIELEALTYIRGRSIPKQWILIDEAQNLTKENIKTIITRAGMGSKIVLTGDIQQIDNYRLTATSN GFVTLIDAFKNQDLYAHISLSRTERSRLAALGVDLLP
Sequences:
>Translated_437_residues MHIRILDTNVLLDRPINEIIVSLEPCKIVIPLAVVNELDRFKGLEDARGHCARQAIRFLDSLRPHLHQGVSLPSGHQILV EVNHCNVPLPEYLPKEKVDTRILAIAKGFKEEQHYPVTLITQDICQRVIADTLGVSAENYAAEQVNLDLLYRGWDTINVS YEEVQDFYQLRHIATNKDLLENQFICMEDSLGGRHLGRYRKGFIHPLRRELHAFGLGPAEGNLEQSFLMDALLDPNIELV SILGPAGTGKTLLALAAGLQQVVNQRLYSKLIVTRALIPHSRDIGALPGTKKEKLTPWMAAIYDNLEFLTQNFVSSKHEE RCSTAERVERFMEEGFIELEALTYIRGRSIPKQWILIDEAQNLTKENIKTIITRAGMGSKIVLTGDIQQIDNYRLTATSN GFVTLIDAFKNQDLYAHISLSRTERSRLAALGVDLLP >Mature_437_residues MHIRILDTNVLLDRPINEIIVSLEPCKIVIPLAVVNELDRFKGLEDARGHCARQAIRFLDSLRPHLHQGVSLPSGHQILV EVNHCNVPLPEYLPKEKVDTRILAIAKGFKEEQHYPVTLITQDICQRVIADTLGVSAENYAAEQVNLDLLYRGWDTINVS YEEVQDFYQLRHIATNKDLLENQFICMEDSLGGRHLGRYRKGFIHPLRRELHAFGLGPAEGNLEQSFLMDALLDPNIELV SILGPAGTGKTLLALAAGLQQVVNQRLYSKLIVTRALIPHSRDIGALPGTKKEKLTPWMAAIYDNLEFLTQNFVSSKHEE RCSTAERVERFMEEGFIELEALTYIRGRSIPKQWILIDEAQNLTKENIKTIITRAGMGSKIVLTGDIQQIDNYRLTATSN GFVTLIDAFKNQDLYAHISLSRTERSRLAALGVDLLP
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=211, Percent_Identity=33.175355450237, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1787257, Length=193, Percent_Identity=27.4611398963731, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 49298; Mature: 49298
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIRILDTNVLLDRPINEIIVSLEPCKIVIPLAVVNELDRFKGLEDARGHCARQAIRFLD CEEEEEECCEEHHCCHHHHHEECCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SLRPHLHQGVSLPSGHQILVEVNHCNVPLPEYLPKEKVDTRILAIAKGFKEEQHYPVTLI HHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEH TQDICQRVIADTLGVSAENYAAEQVNLDLLYRGWDTINVSYEEVQDFYQLRHIATNKDLL HHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEECCCEEECCHHHHHHHHHHHHHHCCHHHH ENQFICMEDSLGGRHLGRYRKGFIHPLRRELHAFGLGPAEGNLEQSFLMDALLDPNIELV HCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEE SILGPAGTGKTLLALAAGLQQVVNQRLYSKLIVTRALIPHSRDIGALPGTKKEKLTPWMA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHH AIYDNLEFLTQNFVSSKHEERCSTAERVERFMEEGFIELEALTYIRGRSIPKQWILIDEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCEEEEECH QNLTKENIKTIITRAGMGSKIVLTGDIQQIDNYRLTATSNGFVTLIDAFKNQDLYAHISL HHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCEEEEEECCCCEEEEEHHCCCCEEEEEEE SRTERSRLAALGVDLLP CHHHHHHHHHHCCCCCC >Mature Secondary Structure MHIRILDTNVLLDRPINEIIVSLEPCKIVIPLAVVNELDRFKGLEDARGHCARQAIRFLD CEEEEEECCEEHHCCHHHHHEECCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SLRPHLHQGVSLPSGHQILVEVNHCNVPLPEYLPKEKVDTRILAIAKGFKEEQHYPVTLI HHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEH TQDICQRVIADTLGVSAENYAAEQVNLDLLYRGWDTINVSYEEVQDFYQLRHIATNKDLL HHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEECCCEEECCHHHHHHHHHHHHHHCCHHHH ENQFICMEDSLGGRHLGRYRKGFIHPLRRELHAFGLGPAEGNLEQSFLMDALLDPNIELV HCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEE SILGPAGTGKTLLALAAGLQQVVNQRLYSKLIVTRALIPHSRDIGALPGTKKEKLTPWMA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHH AIYDNLEFLTQNFVSSKHEERCSTAERVERFMEEGFIELEALTYIRGRSIPKQWILIDEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCEEEEECH QNLTKENIKTIITRAGMGSKIVLTGDIQQIDNYRLTATSNGFVTLIDAFKNQDLYAHISL HHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCEEEEEECCCCEEEEEHHCCCCEEEEEEE SRTERSRLAALGVDLLP CHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]