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The map label for this gene is 134298738

Identifier: 134298738

GI number: 134298738

Start: 931091

End: 932332

Strand: Reverse

Name: 134298738

Synonym: Dred_0872

Alternate gene names: NA

Gene position: 932332-931091 (Counterclockwise)

Preceding gene: 134298740

Following gene: 134298737

Centisome position: 25.84

GC content: 37.6

Gene sequence:

>1242_bases
ATGGACAAGGATACCAGTAAATCCACATATAATCAACTATTTCAAGCAATTTATAATGAAAAATTTTTAAGCAATGTCAA
AGAATCAGAAGTTGATGCTTACACGAAGAAGTTAACCGTTGTCAAACTAATTCAAATGATTTCCTATGCACAGTTAGAGC
AACTTAAAGGTCTACGCCATATCAGTAACAGCTTGAACAATGATAATTTTAGATCAGCAGTAGGTTTAGATTCAATTAGT
GCTTCACAGTTATCCCGTAAATTAAGAGAGTTATCTCCTGAATTAATTCAGTCTCTGTTTTCTGATATAGTCCATCAGTT
TGGAACCCAAATCGGTTTTAAATCCATAAGGCATGAATTAGGTCGTATTTATCTGATAGACTCTTCAACCATAAGCCTTT
GTCTTTCCCGATATAGATGGGCAGAGTTCAGAAAAACCAAAAGCGGAGTTAAATTACACCTCCGTATCCAACTGTTTGAA
CAAGGGGTTCTACCAGACAAAGCAATAATTAAACCGGCCAAACCTGCTGACAAAACACAAATGGATGCCTTGGTTGTAGA
AGAAGATGCCCTAAACGTTTTTGACCGTGGCTACCTGGATTACAAGAAATTCGACAAATATTGTAATAACGGTACCAGAT
TTGTTAGTCGTCTAAAGAGTAATGCAATAGTTGAAACATTAGAGGAATTTCCAACAAACCCAGATAGCTTAATCAAAAAA
GACCAAAAGGTAATCTTAGGCAAAGACGGCATAACCAAGATGCAATACCCCTTGCGGCTAATAGAAACAGAGGATACCGA
AGGTAAGCCTGTAATTATCATTACCAATGACTATGAGTTAAGTGCCGAGGAAATAAGCTATATATATCGCTACCGCTGGC
AAATCGAATTATTCTTTAAGTGGATCAAACAACATCTCTGTGTAAAACACTTCTATGGTCTAAGCCAGCAGGCTGTGGAA
AACCAATTACTGATAGCGCTGATTACCTACTGTTTAATGATATTGCTTAAAATGAAAACCGGTTACGAGGGTCCGTTACT
AAAAATTAAGATGTTGCTTAGCACATGCCTTTACATAGAATTCTCTGAGTTTGTACGAAAACTCCAGCTCAAGTCAGGCC
AAAGTTCAAGAGGACGACGGTGTATAGACCATGAAAAAGTCTACAACATTACGTTAGTACAGGTACTACAAGGTGAGGCA
GAACACCTGGATGATCTAACTTACGACCCGATAATAGCTTAG

Upstream 100 bases:

>100_bases
TATAATGGAATATTTTGTCTACGAATAAATAAAAAATCTCCTTATAATTGAGATATAATAGGTAGTCCTGTCCATAATCT
CAAAAATAAGGAGAACACGC

Downstream 100 bases:

>100_bases
GAATTACATGATCTGAAAAATGTGGATAAAGGACTACCTCTTAAGTGGTTGTTCCTTTAGCACAAAGAGAAATAAGGTAA
TTGGTGTATACAACCAAATT

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDKDTSKSTYNQLFQAIYNEKFLSNVKESEVDAYTKKLTVVKLIQMISYAQLEQLKGLRHISNSLNNDNFRSAVGLDSIS
ASQLSRKLRELSPELIQSLFSDIVHQFGTQIGFKSIRHELGRIYLIDSSTISLCLSRYRWAEFRKTKSGVKLHLRIQLFE
QGVLPDKAIIKPAKPADKTQMDALVVEEDALNVFDRGYLDYKKFDKYCNNGTRFVSRLKSNAIVETLEEFPTNPDSLIKK
DQKVILGKDGITKMQYPLRLIETEDTEGKPVIIITNDYELSAEEISYIYRYRWQIELFFKWIKQHLCVKHFYGLSQQAVE
NQLLIALITYCLMILLKMKTGYEGPLLKIKMLLSTCLYIEFSEFVRKLQLKSGQSSRGRRCIDHEKVYNITLVQVLQGEA
EHLDDLTYDPIIA

Sequences:

>Translated_413_residues
MDKDTSKSTYNQLFQAIYNEKFLSNVKESEVDAYTKKLTVVKLIQMISYAQLEQLKGLRHISNSLNNDNFRSAVGLDSIS
ASQLSRKLRELSPELIQSLFSDIVHQFGTQIGFKSIRHELGRIYLIDSSTISLCLSRYRWAEFRKTKSGVKLHLRIQLFE
QGVLPDKAIIKPAKPADKTQMDALVVEEDALNVFDRGYLDYKKFDKYCNNGTRFVSRLKSNAIVETLEEFPTNPDSLIKK
DQKVILGKDGITKMQYPLRLIETEDTEGKPVIIITNDYELSAEEISYIYRYRWQIELFFKWIKQHLCVKHFYGLSQQAVE
NQLLIALITYCLMILLKMKTGYEGPLLKIKMLLSTCLYIEFSEFVRKLQLKSGQSSRGRRCIDHEKVYNITLVQVLQGEA
EHLDDLTYDPIIA
>Mature_413_residues
MDKDTSKSTYNQLFQAIYNEKFLSNVKESEVDAYTKKLTVVKLIQMISYAQLEQLKGLRHISNSLNNDNFRSAVGLDSIS
ASQLSRKLRELSPELIQSLFSDIVHQFGTQIGFKSIRHELGRIYLIDSSTISLCLSRYRWAEFRKTKSGVKLHLRIQLFE
QGVLPDKAIIKPAKPADKTQMDALVVEEDALNVFDRGYLDYKKFDKYCNNGTRFVSRLKSNAIVETLEEFPTNPDSLIKK
DQKVILGKDGITKMQYPLRLIETEDTEGKPVIIITNDYELSAEEISYIYRYRWQIELFFKWIKQHLCVKHFYGLSQQAVE
NQLLIALITYCLMILLKMKTGYEGPLLKIKMLLSTCLYIEFSEFVRKLQLKSGQSSRGRRCIDHEKVYNITLVQVLQGEA
EHLDDLTYDPIIA

Specific function: Unknown

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559
- InterPro:   IPR014736 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 47819; Mature: 47819

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDTSKSTYNQLFQAIYNEKFLSNVKESEVDAYTKKLTVVKLIQMISYAQLEQLKGLRH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISNSLNNDNFRSAVGLDSISASQLSRKLRELSPELIQSLFSDIVHQFGTQIGFKSIRHEL
HHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRIYLIDSSTISLCLSRYRWAEFRKTKSGVKLHLRIQLFEQGVLPDKAIIKPAKPADKTQ
CEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHCCCCCCHHHCCCCCCCCCHH
MDALVVEEDALNVFDRGYLDYKKFDKYCNNGTRFVSRLKSNAIVETLEEFPTNPDSLIKK
HHHHEECHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
DQKVILGKDGITKMQYPLRLIETEDTEGKPVIIITNDYELSAEEISYIYRYRWQIELFFK
CCCEEECCCCCCHHHCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
WIKQHLCVKHFYGLSQQAVENQLLIALITYCLMILLKMKTGYEGPLLKIKMLLSTCLYIE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
FSEFVRKLQLKSGQSSRGRRCIDHEKVYNITLVQVLQGEAEHLDDLTYDPIIA
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MDKDTSKSTYNQLFQAIYNEKFLSNVKESEVDAYTKKLTVVKLIQMISYAQLEQLKGLRH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISNSLNNDNFRSAVGLDSISASQLSRKLRELSPELIQSLFSDIVHQFGTQIGFKSIRHEL
HHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRIYLIDSSTISLCLSRYRWAEFRKTKSGVKLHLRIQLFEQGVLPDKAIIKPAKPADKTQ
CEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHCCCCCCHHHCCCCCCCCCHH
MDALVVEEDALNVFDRGYLDYKKFDKYCNNGTRFVSRLKSNAIVETLEEFPTNPDSLIKK
HHHHEECHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
DQKVILGKDGITKMQYPLRLIETEDTEGKPVIIITNDYELSAEEISYIYRYRWQIELFFK
CCCEEECCCCCCHHHCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
WIKQHLCVKHFYGLSQQAVENQLLIALITYCLMILLKMKTGYEGPLLKIKMLLSTCLYIE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
FSEFVRKLQLKSGQSSRGRRCIDHEKVYNITLVQVLQGEAEHLDDLTYDPIIA
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]