Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357895

GI number: 13357895

Start: 379425

End: 381467

Strand: Direct

Name: Not Available

Synonym: UU335

Alternate gene names: NA

Gene position: 379425-381467 (Clockwise)

Preceding gene: 13357894

Following gene: 13357896

Centisome position: 50.47

GC content: 24.03

Gene sequence:

>2043_bases
ATGTTTTATATTAATTTAAGGGTGAAAACAATGATGGAAAAATTAAAAAACAACAAGACTTTGTTTTTGAATGTAGAACA
AGCTCAAAAACTAGGGATTAATAACCCTTTAACACAAGAGATTTTTTTAGATGATCAAAAGTTAAAAGTTCATTTAATTA
ATAGTATAAAAGATGAGTTTTACTTAAAAAAAAGTATTAGTAAAGGTTATGCTTATTTTAATAGTTTAGAACAATTTAAG
ACTATGGAGCTTGATGTTTTAGATAACTATCAATTTGCAAAAATAGCAGCTACTAATTTAGATGAGTATGATCAATTAGT
TTACACAAAAACTCGTCAATATTTAATTAATAAAGAATTTTGAACTAATGATGGTTTAGATGCATTTATTGGTGATGATT
TTAAAAGAAAACAATTAACGAGCAAAGAAATCGTTAATCTAAAAACAAAATATGATTTATGAATACAAGAATTACATTTT
AATAATGCACGAATTAGTAAACAAATTCATAATTTAAGTATTCATGGTCAAAATAAATTAGATTATGAGAAATTTTATGA
TAAAAAAGCAACCCTTGAATCAAATTTAGATATTCTTCAAATTTTAATTTATTTAAGATCTTCATTACTTGAGTTAGATT
TTGACGATCTTTTTAAAGATGATCAAAATAAAATAAGTATTCGTCAATTATTAGTTAATGATTTAGAATACTTGCCGTTT
TCATTTCAACGTTATGATTATGAATCAAGACGTAATTTCATTAGAAACTCACGTCAATTAGTTGATACCTCAATTGATTT
TGACGATCTTGAATATGATTTTTTGCACAATAAGAAACCAAAACAAGAACTAGAAAAAAATAATGAATCAATTAAAATAG
CTGAATTAAAAAAATTTGAAAATTCACAATTAAGTGATGAACAACAATCTAATTTAGAAAAAGAGTTCTATAGTATTGGA
AGAATTAACTGTTTTGACGAAGTTAGCGAAAATAAACAAGAATTAAACAAAGAACAATTAGTAATCGATAAAAAAAATGG
GTATTTGAAGCCACGTAGTTACTTACGTCATCATGAAACTCCATTTATGGTTGACATTGAGAACCGGGTAGACTTTTTAA
TGGCAGGATATGAAATTATTAAAAATGATGATCCATATGCAATTAAACAAGAAATATTAAAAAATACCATTTTAGAACAA
CAAAAGCTTGTCGAACAAGATGATCATGATTTTAAAGTTAAAAATGATGATCAAGAAGCAAATGAAGAATTATTGGACAA
TACTGATAAATTAGAAAATCAAGATTCTACAAGTGCTGTTGAATTTAATGATTCATCTGAAGTTACTCAAGTAGTAAAAA
CGGATGAAAATGTTGATAATTTAATTAAAACTAAGCAAATAACTAGTTTTAACGATCTTAAACAAGAGCAATCATCTCAA
GAAAATATTATTAAAAATGATCTTTCATCAATTCAAATTCGTTTAGATGAAATTATTAATGTACATGAAAAAGATACTAA
ATTACAAACCGAACTAAATTCAATTATGATAGATAGTAATGAAAAAAATATTGATGATAGTTTAAATAATTTAAATGAAC
AAATACGAATTCAAGATCAAGAATTAGAATCATCAGATAATCAAAATGTAATTATTGAAGAAGAAATTAATACCAAAAAT
TTAAATAATAAAGCTGATGTTGGTGTTATGAGTGTTGAAAAAAAATATGAACCTGAAGAGGAAATGGTTAATTTTGAATT
TGAAATACCTGAAAACCAAAAAGAATCAGTTAACCAAGATGTTTTAAATAGTAATAGTATTGATAATTTTAAAGAAGAAA
AAGCTAAAGAAAATACTTTCTTAACACCAAAAGAAATAGAAAATAATGATTTATCATCACAAATTGAATTAACACCTGCT
GATTTTGAACTTAAGACACAAGAAATTAATGACGAAACTGAACGTTTATTGGATGAATTAAATAATAATAAACCTAAAGA
AAAGAAGAAATTTTGGACATGATTTAACTCAAAAAAAAGATAA

Upstream 100 bases:

>100_bases
ATTAAATTAAGTTAGTAACAACTTCATGAGTTGTTATTTTTTTATTTTTTTTAGATATAATTTAATTTAGACGTATGCTA
TTAATGTATAATTTTAAATA

Downstream 100 bases:

>100_bases
ATAAAAAAAAGGAATTATTAATTATGAATAAAACTAATCAAATTGTGGATTTATTAACCAATAAACAAAATAATTCAATT
CAAAGACGCGATAATCTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFK
TMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEFWTNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDLWIQELHF
NNARISKQIHNLSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPF
SFQRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIG
RINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQ
QKLVEQDDHDFKVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQ
ENIIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKN
LNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPA
DFELKTQEINDETERLLDELNNNKPKEKKKFWTWFNSKKR

Sequences:

>Translated_680_residues
MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFK
TMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEF*TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDL*IQELHF
NNARISKQIHNLSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPF
SFQRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIG
RINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQ
QKLVEQDDHDFKVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQ
ENIIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKN
LNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPA
DFELKTQEINDETERLLDELNNNKPKEKKKFWT*FNSKKR
>Mature_680_residues
MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFK
TMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEF*TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDL*IQELHF
NNARISKQIHNLSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPF
SFQRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIG
RINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQ
QKLVEQDDHDFKVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQ
ENIIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKN
LNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPA
DFELKTQEINDETERLLDELNNNKPKEKKKFWT*FNSKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79990; Mature: 79990

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEF
CEEEEEEHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCHHHEECCCHHHHHHHHHHHHHH
YLKKSISKGYAYFNSLEQFKTMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEF
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCC
TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDLIQELHFNNARISKQIHNLSIHGQNKLDY
CCCCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEECCCCCCCH
EKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSF
HHHHCHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
QRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENS
HHCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEEHHHHHHCCC
QLSDEQQSNLEKEFYSIGRINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPF
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHCCCCE
MVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDFKVKNDDQEANE
EEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHH
ELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQEN
HHHCCHHHHCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
IIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQEL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCHHHHHHCCCHHEEEEHHHH
ESSDNQNVIIEEEINTKNLNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVL
CCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHCCCCHHHHEEEEEECCCCHHHHHHHHHH
NSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPADFELKTQEINDETERLLDELNN
CCCCCCHHHHHHHCCCCCCCCHHCCCCCCCCEEEECCCCCEEEHHHCCCHHHHHHHHHCC
NKPKEKKKFWTFNSKKR
CCCCHHHHEECCCCCCC
>Mature Secondary Structure
MFYINLRVKTMMEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEF
CEEEEEEHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCHHHEECCCHHHHHHHHHHHHHH
YLKKSISKGYAYFNSLEQFKTMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEF
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCC
TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDLIQELHFNNARISKQIHNLSIHGQNKLDY
CCCCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEECCCCCCCH
EKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSF
HHHHCHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
QRYDYESRRNFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENS
HHCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEEHHHHHHCCC
QLSDEQQSNLEKEFYSIGRINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPF
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHCCCCE
MVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDFKVKNDDQEANE
EEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHH
ELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQEN
HHHCCHHHHCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
IIKNDLSSIQIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQEL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCHHHHHHCCCHHEEEEHHHH
ESSDNQNVIIEEEINTKNLNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVL
CCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHCCCCHHHHEEEEEECCCCHHHHHHHHHH
NSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPADFELKTQEINDETERLLDELNN
CCCCCCHHHHHHHCCCCCCCCHHCCCCCCCCEEEECCCCCEEEHHHCCCHHHHHHHHHCC
NKPKEKKKFWTFNSKKR
CCCCHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA