Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357879

GI number: 13357879

Start: 366142

End: 366393

Strand: Direct

Name: Not Available

Synonym: UU319

Alternate gene names: NA

Gene position: 366142-366393 (Clockwise)

Preceding gene: 13357878

Following gene: 13357880

Centisome position: 48.71

GC content: 24.6

Gene sequence:

>252_bases
ATGGCAATGAAAGTTAATGAAAGAACTTGTGTTTTTAGTAAAGAAAAATATCCTAAAGATCATTTAGTTCGCTTTGTTAT
TATTAACGGTGAGTTAATTTTTAGTTTGAATTATCATCGTGGGTATTATTTAATGATTCAAAAGAATACAAACATTCAAA
AGGTGTGTCAATTTCTAAAAAAACGTTTTATGATTAAAAACGAAGAACAAGTTTATCGGATTTTAGAGCAATTAATTCAA
TCATTAATTTAA

Upstream 100 bases:

>100_bases
AAAAAAGTTGTTTCTTCAAATGATGAAGATGGTGAAAATGATGAAACACAATTAGAATATCTTGAAGGATTCGAAGATTT
TAAATTCTAATTTAAATATT

Downstream 100 bases:

>100_bases
AATATATAGAGTAATATAAGTAAGAGGTAAAAATATGGCGAAAAAAAATATCAAACAAAAGAAAGATAATCGGATAGCAA
TCGATGTAAAAAAACACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MAMKVNERTCVFSKEKYPKDHLVRFVIINGELIFSLNYHRGYYLMIQKNTNIQKVCQFLKKRFMIKNEEQVYRILEQLIQ
SLI

Sequences:

>Translated_83_residues
MAMKVNERTCVFSKEKYPKDHLVRFVIINGELIFSLNYHRGYYLMIQKNTNIQKVCQFLKKRFMIKNEEQVYRILEQLIQ
SLI
>Mature_82_residues
AMKVNERTCVFSKEKYPKDHLVRFVIINGELIFSLNYHRGYYLMIQKNTNIQKVCQFLKKRFMIKNEEQVYRILEQLIQS
LI

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10117; Mature: 9986

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMKVNERTCVFSKEKYPKDHLVRFVIINGELIFSLNYHRGYYLMIQKNTNIQKVCQFLK
CCEECCCCEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCEEEEEECCCCHHHHHHHHH
KRFMIKNEEQVYRILEQLIQSLI
HHCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AMKVNERTCVFSKEKYPKDHLVRFVIINGELIFSLNYHRGYYLMIQKNTNIQKVCQFLK
CEECCCCEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCEEEEEECCCCHHHHHHHHH
KRFMIKNEEQVYRILEQLIQSLI
HHCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA