Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357869

GI number: 13357869

Start: 354465

End: 355025

Strand: Direct

Name: Not Available

Synonym: UU309

Alternate gene names: NA

Gene position: 354465-355025 (Clockwise)

Preceding gene: 13357866

Following gene: 13357876

Centisome position: 47.15

GC content: 15.86

Gene sequence:

>561_bases
ATGTTTGAACAAGTATTTTTTTTAGCATCCATTAACGACAAAAAGATTATTAGATGATTATATGAACGTTATCATAAAAT
TTTTTTAAAATATATTAATGAGCAATTGAATTTTAAATTTTATACTTTAGAGATTGAAGCAAATGATTTAAAAACTATTA
TTTATGAAATATTTTTAAAAATATTTCAAGTAACTAGAATTAAAAGTTTAAATCAATTTATAGGATTTGTTAAACGGCAA
ATTTATTTTTATTTAGTATATTTATTACGTAAATCTTTATCTAATAAAAATTTAGTTAATCATTTAAATAATAATAATTT
TGAAAATTATGAATTAATTAGTACCAATTCAGATGAAGTTGGTGCTGAATTAAACAACAGATTTTTAATTTATGAATTTT
TAAGAAGTATTCAGAAAGAAAATTTATTTTTATATCATTTTACTATTTTAATTATTAAAGGATATAATACAAAGGAAATT
AGTGAAATTTTAAAAATTAATTCTGCAAAAATTTATTATTATAAAGCACTTTTAAAAAAATATATAAAAAAATTATTATA
A

Upstream 100 bases:

>100_bases
TAAAAAAAATCTAAAAAATTGTGAACATTTTATAAATAAAAAAGATTAAATTATATATTTATAAAACCGTTATTATTTAT
ATAAAAAAAGAGGTTATAAA

Downstream 100 bases:

>100_bases
AAATACTGGGGTGAAGTTACTTTCATTTCCCAGTATTTTTATAAAAGAATCAAAAGATTTTCTTAATTTATGCTGTGACT
TCTAAGTTTGTTTTAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MFEQVFFLASINDKKIIRWLYERYHKIFLKYINEQLNFKFYTLEIEANDLKTIIYEIFLKIFQVTRIKSLNQFIGFVKRQ
IYFYLVYLLRKSLSNKNLVNHLNNNNFENYELISTNSDEVGAELNNRFLIYEFLRSIQKENLFLYHFTILIIKGYNTKEI
SEILKINSAKIYYYKALLKKYIKKLL

Sequences:

>Translated_186_residues
MFEQVFFLASINDKKIIR*LYERYHKIFLKYINEQLNFKFYTLEIEANDLKTIIYEIFLKIFQVTRIKSLNQFIGFVKRQ
IYFYLVYLLRKSLSNKNLVNHLNNNNFENYELISTNSDEVGAELNNRFLIYEFLRSIQKENLFLYHFTILIIKGYNTKEI
SEILKINSAKIYYYKALLKKYIKKLL
>Mature_186_residues
MFEQVFFLASINDKKIIR*LYERYHKIFLKYINEQLNFKFYTLEIEANDLKTIIYEIFLKIFQVTRIKSLNQFIGFVKRQ
IYFYLVYLLRKSLSNKNLVNHLNNNNFENYELISTNSDEVGAELNNRFLIYEFLRSIQKENLFLYHFTILIIKGYNTKEI
SEILKINSAKIYYYKALLKKYIKKLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22553; Mature: 22553

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEQVFFLASINDKKIIRLYERYHKIFLKYINEQLNFKFYTLEIEANDLKTIIYEIFLKI
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCHHHHHHHHHHHHH
FQVTRIKSLNQFIGFVKRQIYFYLVYLLRKSLSNKNLVNHLNNNNFENYELISTNSDEVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCHHHC
AELNNRFLIYEFLRSIQKENLFLYHFTILIIKGYNTKEISEILKINSAKIYYYKALLKKY
HHHCCCEEHHHHHHHHHHCCEEEEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHH
IKKLL
HHHHC
>Mature Secondary Structure
MFEQVFFLASINDKKIIRLYERYHKIFLKYINEQLNFKFYTLEIEANDLKTIIYEIFLKI
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCHHHHHHHHHHHHH
FQVTRIKSLNQFIGFVKRQIYFYLVYLLRKSLSNKNLVNHLNNNNFENYELISTNSDEVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCHHHC
AELNNRFLIYEFLRSIQKENLFLYHFTILIIKGYNTKEISEILKINSAKIYYYKALLKKY
HHHCCCEEHHHHHHHHHHCCEEEEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHH
IKKLL
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA