Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357876

GI number: 13357876

Start: 359326

End: 359706

Strand: Direct

Name: Not Available

Synonym: UU316

Alternate gene names: NA

Gene position: 359326-359706 (Clockwise)

Preceding gene: 13357869

Following gene: 13357877

Centisome position: 47.8

GC content: 21.26

Gene sequence:

>381_bases
ATGAAAAATTTTTCAAAAAATAGAAATATTAATAATTTTAAAAACCCTTTAAGAGTTATTGAAGGAATTGTTCGTGAAAT
TAAAAATAATGAACTTCAAATTGATTTTGTTAATAGTCATAAAAAAGGAGTTTGTAAGTTTATTAATTTGACAGATTATC
ATTGAAATACAATTTCTTCGCGTTTTTTAATTAACAGTAAACACTTATTTTTAGTTTCAAAATTTGACCCAATTCGTCAT
GTTTATTGATTAAATTATAAAATTATTCATCCTATTGAAATTAAAAACAAACGTCGTTCTTACCCCACTTTATCTCATGA
TAGAAATTTACGGATCTTTTTAAATAATCTATTAGAAAAAGAAAATGAATTAAAAAACTAA

Upstream 100 bases:

>100_bases
CTTATTTTATATTTGATAAAAATAATTGATTACCAATAAAATATACTTAGAAATAATTAGTATCATTAACATAGAAATAA
AAATAGTAAGGATATAGAAG

Downstream 100 bases:

>100_bases
AAATTTTTAACATATGAATTAAATTTTAAAATCAATTTATTTCATTAATTTAGAGAATTTTAATTATCAAAAAGCATTAA
AAATTATTTTTATGTTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKNFSKNRNINNFKNPLRVIEGIVREIKNNELQIDFVNSHKKGVCKFINLTDYHWNTISSRFLINSKHLFLVSKFDPIRH
VYWLNYKIIHPIEIKNKRRSYPTLSHDRNLRIFLNNLLEKENELKN

Sequences:

>Translated_126_residues
MKNFSKNRNINNFKNPLRVIEGIVREIKNNELQIDFVNSHKKGVCKFINLTDYH*NTISSRFLINSKHLFLVSKFDPIRH
VY*LNYKIIHPIEIKNKRRSYPTLSHDRNLRIFLNNLLEKENELKN
>Mature_126_residues
MKNFSKNRNINNFKNPLRVIEGIVREIKNNELQIDFVNSHKKGVCKFINLTDYH*NTISSRFLINSKHLFLVSKFDPIRH
VY*LNYKIIHPIEIKNKRRSYPTLSHDRNLRIFLNNLLEKENELKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14883; Mature: 14883

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFSKNRNINNFKNPLRVIEGIVREIKNNELQIDFVNSHKKGVCKFINLTDYHNTISSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCHHHHHHCE
FLINSKHLFLVSKFDPIRHVYLNYKIIHPIEIKNKRRSYPTLSHDRNLRIFLNNLLEKEN
EEECCCEEEEEECCCCEEEEEEEEEEECEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
ELKN
HCCC
>Mature Secondary Structure
MKNFSKNRNINNFKNPLRVIEGIVREIKNNELQIDFVNSHKKGVCKFINLTDYHNTISSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCHHHHHHCE
FLINSKHLFLVSKFDPIRHVYLNYKIIHPIEIKNKRRSYPTLSHDRNLRIFLNNLLEKEN
EEECCCEEEEEECCCCEEEEEEEEEEECEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
ELKN
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA