| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357865
GI number: 13357865
Start: 350065
End: 350832
Strand: Direct
Name: Not Available
Synonym: UU305
Alternate gene names: 13357865
Gene position: 350065-350832 (Clockwise)
Preceding gene: 13357864
Following gene: 13357866
Centisome position: 46.57
GC content: 24.22
Gene sequence:
>768_bases ATGCAAAAAAAATACATTAAAAATACTTTAGGCTTTGATACAAATTTATTTATATATCAAGATAAAAAAATGTTCAATTA TTCAATTGATACTATTCTGTTAGCAAATTTTATAAGCTTATCTTCTAAGACGAAAAAAATTTTAGAAATAGGAACAAATA ATGCTGCATTGAGTATTTTTTTAGCTTTGCGCAAAGAGGATATAAAAATTGATGCGATTGAAATTCAAATAGAAGCAATT AACCTTGCATTATTAAATGTTAGTCAAAATCATTTTGAAAAACAAATTAATATTATACATGCTGATTTTAATCAATATTG GAAAGATTTTGATAAAAGCGAAAATAATAAATATGATGCAATAATCTGTAACCCCCCTTTTTATAAACAAGATAAAATTA TTCCATCAACTAAAAATCCATTAAAAACTTTAGCTTTATATGAAATCACGCTTAATTTTGAACAAATTATGCAAGGGTGT GCTAAGATAATTAAACAAAAAGGAAATTTAGCAATGGTTATTCCTACAACGCGTTTAGTTGATCTTTTAGAAATTATGCG TAAATATCAATTTGAACCAAAACGAATTAAAATGATTTATCCACGAATCTATGAACAATCAAATTTAGTTTTAATAGAAG CGCGTTACAAAAGTGGTTGAGGTACACACTTTGAACCAAATCTTTATTTACATTATGAAGATAAACAAAATCATCAATAT ACTGAAGAAGTTTTAAATTGATATAAACCAATTAAGTTTAAAAAATAA
Upstream 100 bases:
>100_bases AGCTATTAGTGTGGGTTCGATTCCCATCACCCGCTCCATTAATAATATTTAACTAAACTCCACCCTATTAGTGGAGTTTT TCTTTAATTAAGAACTACTT
Downstream 100 bases:
>100_bases TTGTAAGTAAATTAATTAAATTTCTATTTTAAGGATGATGAAAATGAATAATATGGATAAATATAATTTAATTATAGGTA GTCATGTAAGTTTAAAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIFLALRKEDIKIDAIEIQIEAI NLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDAIICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGC AKIIKQKGNLAMVIPTTRLVDLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSGWGTHFEPNLYLHYEDKQNHQY TEEVLNWYKPIKFKK
Sequences:
>Translated_255_residues MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIFLALRKEDIKIDAIEIQIEAI NLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDAIICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGC AKIIKQKGNLAMVIPTTRLVDLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSG*GTHFEPNLYLHYEDKQNHQY TEEVLN*YKPIKFKK >Mature_255_residues MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIFLALRKEDIKIDAIEIQIEAI NLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDAIICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGC AKIIKQKGNLAMVIPTTRLVDLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSG*GTHFEPNLYLHYEDKQNHQY TEEVLN*YKPIKFKK
Specific function: Unknown
COG id: COG4123
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082131, Length=161, Percent_Identity=29.1925465838509, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: NA
Molecular weight: Translated: 29798; Mature: 29798
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIF CCCHHHHHHCCCCCEEEEEECCEEECCCHHHHHHHHHHHHCHHHHEEEEECCCCCEEEEE LALRKEDIKIDAIEIQIEAINLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDA EEEECCCCEEEEEEEEEEEEEEEEEECCHHHHHHEEEEEEECHHHHHHHHCCCCCCCEEE IICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGCAKIIKQKGNLAMVIPTTRLV EEECCCCCCCCCCCCCCCCCHHEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEECHHHHH DLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSGGTHFEPNLYLHYEDKQNHQYT HHHHHHHHHCCCCCCEEEEEHHEECCCCEEEEEEEECCCCCEECCEEEEEEECCCCCHHH EEVLNYKPIKFKK HHHHCCCCCEECC >Mature Secondary Structure MQKKYIKNTLGFDTNLFIYQDKKMFNYSIDTILLANFISLSSKTKKILEIGTNNAALSIF CCCHHHHHHCCCCCEEEEEECCEEECCCHHHHHHHHHHHHCHHHHEEEEECCCCCEEEEE LALRKEDIKIDAIEIQIEAINLALLNVSQNHFEKQINIIHADFNQYWKDFDKSENNKYDA EEEECCCCEEEEEEEEEEEEEEEEEECCHHHHHHEEEEEEECHHHHHHHHCCCCCCCEEE IICNPPFYKQDKIIPSTKNPLKTLALYEITLNFEQIMQGCAKIIKQKGNLAMVIPTTRLV EEECCCCCCCCCCCCCCCCCHHEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEECHHHHH DLLEIMRKYQFEPKRIKMIYPRIYEQSNLVLIEARYKSGGTHFEPNLYLHYEDKQNHQYT HHHHHHHHHCCCCCCEEEEEHHEECCCCEEEEEEEECCCCCEECCEEEEEEECCCCCHHH EEVLNYKPIKFKK HHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]