Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357854

GI number: 13357854

Start: 338037

End: 338642

Strand: Direct

Name: Not Available

Synonym: UU294

Alternate gene names: NA

Gene position: 338037-338642 (Clockwise)

Preceding gene: 13357853

Following gene: 13357855

Centisome position: 44.97

GC content: 18.48

Gene sequence:

>606_bases
ATGATTCAAAAAGCAAAATTTTATGCTGGATATATTTCTCGTCTGCGTTTTATTCAAAAATTAAGATATGAAATTCAAAA
CGAAAAAAAAACATTGAATAAAATAATTAAAGTTGTGAATGATGCTGATATTAGTACCTTATATGATTTTAAAGATAAAA
ATCTAACTATTTATACGAAAACATTTTATTTCCATAATTATCAATTTGTCAATGCTAATAAAAAAAATTATTTTATTTCT
AAAAAAACTATTAAATCTGTTATTACAGAAAATTTATTAGATATAGGATTTACTTGAACAATTATTTATAATGATCAAAC
AAAAACTTATATCAGGCCAACTGATTTTATGACCAAAAATTTTATTGATTATAAAAAAAATGAAAATAAAATTGCTACTC
GTTCGAAAATTTTATATGATATGATTGTTAAAAATGAATCATTAAATATTAATCATAGTGAATATGAATCTTTATTAGTC
AATAATGAATGAAAAAGATATTATGAAAATATGATTAATATATTTTTATATCAATATTATAATGAAGGTATAAAAAACGA
TATTGATTTTTTAAATCATTTTTTATTAAAAGATGCACTAAAATAG

Upstream 100 bases:

>100_bases
TTACTAATGATATTTCAAAATTAGCTAATGATTATATTGATAATCACACAAAATTATTGAGTCTATTAATAAAAATAAAA
AAATTAGTTTAACGAATGAA

Downstream 100 bases:

>100_bases
GAGAAAGATATGCCAAGAAAACATTTAATCGCTAGTGGAATTAATAAGAAACAACAACAACAAGCTAAAATTTGAATGAA
ATGTGCAAAAGAAATTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MIQKAKFYAGYISRLRFIQKLRYEIQNEKKTLNKIIKVVNDADISTLYDFKDKNLTIYTKTFYFHNYQFVNANKKNYFIS
KKTIKSVITENLLDIGFTWTIIYNDQTKTYIRPTDFMTKNFIDYKKNENKIATRSKILYDMIVKNESLNINHSEYESLLV
NNEWKRYYENMINIFLYQYYNEGIKNDIDFLNHFLLKDALK

Sequences:

>Translated_201_residues
MIQKAKFYAGYISRLRFIQKLRYEIQNEKKTLNKIIKVVNDADISTLYDFKDKNLTIYTKTFYFHNYQFVNANKKNYFIS
KKTIKSVITENLLDIGFT*TIIYNDQTKTYIRPTDFMTKNFIDYKKNENKIATRSKILYDMIVKNESLNINHSEYESLLV
NNE*KRYYENMINIFLYQYYNEGIKNDIDFLNHFLLKDALK
>Mature_201_residues
MIQKAKFYAGYISRLRFIQKLRYEIQNEKKTLNKIIKVVNDADISTLYDFKDKNLTIYTKTFYFHNYQFVNANKKNYFIS
KKTIKSVITENLLDIGFT*TIIYNDQTKTYIRPTDFMTKNFIDYKKNENKIATRSKILYDMIVKNESLNINHSEYESLLV
NNE*KRYYENMINIFLYQYYNEGIKNDIDFLNHFLLKDALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24032; Mature: 24032

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKAKFYAGYISRLRFIQKLRYEIQNEKKTLNKIIKVVNDADISTLYDFKDKNLTIYTK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCEEEEEE
TFYFHNYQFVNANKKNYFISKKTIKSVITENLLDIGFTTIIYNDQTKTYIRPTDFMTKNF
EEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCHHHHHHH
IDYKKNENKIATRSKILYDMIVKNESLNINHSEYESLLVNNEKRYYENMINIFLYQYYNE
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
GIKNDIDFLNHFLLKDALK
CCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQKAKFYAGYISRLRFIQKLRYEIQNEKKTLNKIIKVVNDADISTLYDFKDKNLTIYTK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCEEEEEE
TFYFHNYQFVNANKKNYFISKKTIKSVITENLLDIGFTTIIYNDQTKTYIRPTDFMTKNF
EEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCHHHHHHH
IDYKKNENKIATRSKILYDMIVKNESLNINHSEYESLLVNNEKRYYENMINIFLYQYYNE
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
GIKNDIDFLNHFLLKDALK
CCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA