| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357825
GI number: 13357825
Start: 300712
End: 301041
Strand: Direct
Name: Not Available
Synonym: UU265
Alternate gene names: NA
Gene position: 300712-301041 (Clockwise)
Preceding gene: 13357822
Following gene: 13357826
Centisome position: 40.0
GC content: 29.09
Gene sequence:
>330_bases ATGAATTTTTCAAGTTTTATATTTAAAGTTTCTGATGTTTTTAAATCAGTTATTCATGAAGCTTCAGATGTTGTTACTAA AGCAGATTTAGATAATGCTAATGCACATACACATTCATTAGCAGTTGGCTTAGGTATTGGAATTGTTTTATTTTTAATCG CAGGACTTATTATCGGTTATTTTATTTCGATGAAAATTATGAAACGCCAATTGAAGAAGAATCCACCAATTTCAAAGGAT ACAATTCGTATGATTTATCAACAAGTAGGACGTAAGCCAAGTGAGTCACAAATTAATGAGATTTATAATCGGGCAGTAAA ACAAAAATAA
Upstream 100 bases:
>100_bases TTAACTTAGTCATTTATTATAATATATAACTGTATGACTAAATATTATATTTAATAATGTCAATTAAGTAAATAAAAAGT AATTTTTTTTAGGGGTAGTT
Downstream 100 bases:
>100_bases ATATATGGCAAAATTTATTAAATCTGCACACTATTTTGACCAATATCCAATTGATAAGCAGTTTGAAATATGTGTAATTG GTAGATCAAATGTCGGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MNFSSFIFKVSDVFKSVIHEASDVVTKADLDNANAHTHSLAVGLGIGIVLFLIAGLIIGYFISMKIMKRQLKKNPPISKD TIRMIYQQVGRKPSESQINEIYNRAVKQK
Sequences:
>Translated_109_residues MNFSSFIFKVSDVFKSVIHEASDVVTKADLDNANAHTHSLAVGLGIGIVLFLIAGLIIGYFISMKIMKRQLKKNPPISKD TIRMIYQQVGRKPSESQINEIYNRAVKQK >Mature_109_residues MNFSSFIFKVSDVFKSVIHEASDVVTKADLDNANAHTHSLAVGLGIGIVLFLIAGLIIGYFISMKIMKRQLKKNPPISKD TIRMIYQQVGRKPSESQINEIYNRAVKQK
Specific function: Unknown
COG id: COG3763
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0154 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y265_UREPA (Q9PQM6)
Other databases:
- EMBL: AF222894 - RefSeq: NP_078099.1 - GeneID: 875778 - GenomeReviews: AF222894_GR - KEGG: uur:UU265 - HOGENOM: HBG734399 - OMA: HEATDIV - ProtClustDB: CLSK2298851 - BioCyc: UURE95667:UU265-MONOMER - HAMAP: MF_00363 - InterPro: IPR005359 - ProDom: PD048972
Pfam domain/function: PF03672 UPF0154
EC number: NA
Molecular weight: Translated: 12224; Mature: 12224
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbfceb44)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFSSFIFKVSDVFKSVIHEASDVVTKADLDNANAHTHSLAVGLGIGIVLFLIAGLIIGY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FISMKIMKRQLKKNPPISKDTIRMIYQQVGRKPSESQINEIYNRAVKQK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCH >Mature Secondary Structure MNFSSFIFKVSDVFKSVIHEASDVVTKADLDNANAHTHSLAVGLGIGIVLFLIAGLIIGY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FISMKIMKRQLKKNPPISKDTIRMIYQQVGRKPSESQINEIYNRAVKQK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11048724