Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357822

GI number: 13357822

Start: 294987

End: 295574

Strand: Direct

Name: Not Available

Synonym: UU262

Alternate gene names: 13357822

Gene position: 294987-295574 (Clockwise)

Preceding gene: 13357821

Following gene: 13357825

Centisome position: 39.24

GC content: 23.3

Gene sequence:

>588_bases
ATGTCATTTAAAACAATTGCATATACCCAAAAAAATATAAAAATTATTAAAAAATCAAAATTTATAACGATCGTTGAACC
TATTAGCGATAAAAATGAAGTTCAATCATTATTTAAAAAATATAAAGAACAATATTACGATGCAACGCACATTTGTTTTG
CTTATGTGATAGGTCGTGAATTTAATTATATGAAAGCATATGATGATGGTGAACCAAATGGAACAGCTGGAATACCTATT
TTAAATATCATTAAGATCAAATCATTAACCAATGTGATTATATTTGTTGTACGTTATTTTGGTGGCATTAAATTAGGCAC
TGGAGGATTAATTCGTGCTTATTCACAATGTGCTAAAGAAATTATAGATAACTGTGAAATAATAATTTTACAAAAATATT
TTTACTATAAAGTTGTTTATAAGCTAAAAAATACTAAATTTGCAAAGCAAATTTTAACATCAATTAGTTATGAAAAACTA
ATAGAGAGTTATGAAGATGATAGAGTTATTTTAAAAATCCGAATTAACACCAAAATTAATATATTTATGTCTAAGATTGA
ATTTATTTTTATAAAACATGATTATTAA

Upstream 100 bases:

>100_bases
AATATTCTTGATTTTATTTTAAATAAACAATTATATTTAAACTTAACAATTATAGAAGTCCAACAAATTTGCATAGATTT
GGAAGAATTTAAAAAAACAA

Downstream 100 bases:

>100_bases
TAATGTTTTACTCTAAAGGATTAGTTAACGCGTATTTTTTACATATTTCACCAATTGTTCTCTCTATTCTAAAAAACAAT
CTTGCTGTATCATATTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSFKTIAYTQKNIKIIKKSKFITIVEPISDKNEVQSLFKKYKEQYYDATHICFAYVIGREFNYMKAYDDGEPNGTAGIPI
LNIIKIKSLTNVIIFVVRYFGGIKLGTGGLIRAYSQCAKEIIDNCEIIILQKYFYYKVVYKLKNTKFAKQILTSISYEKL
IESYEDDRVILKIRINTKINIFMSKIEFIFIKHDY

Sequences:

>Translated_195_residues
MSFKTIAYTQKNIKIIKKSKFITIVEPISDKNEVQSLFKKYKEQYYDATHICFAYVIGREFNYMKAYDDGEPNGTAGIPI
LNIIKIKSLTNVIIFVVRYFGGIKLGTGGLIRAYSQCAKEIIDNCEIIILQKYFYYKVVYKLKNTKFAKQILTSISYEKL
IESYEDDRVILKIRINTKINIFMSKIEFIFIKHDY
>Mature_194_residues
SFKTIAYTQKNIKIIKKSKFITIVEPISDKNEVQSLFKKYKEQYYDATHICFAYVIGREFNYMKAYDDGEPNGTAGIPIL
NIIKIKSLTNVIIFVVRYFGGIKLGTGGLIRAYSQCAKEIIDNCEIIILQKYFYYKVVYKLKNTKFAKQILTSISYEKLI
ESYEDDRVILKIRINTKINIFMSKIEFIFIKHDY

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IMPACT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR020568
- InterPro:   IPR000640
- InterPro:   IPR015796
- InterPro:   IPR015269
- InterPro:   IPR020569
- InterPro:   IPR001498 [H]

Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]

EC number: NA

Molecular weight: Translated: 22863; Mature: 22732

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKTIAYTQKNIKIIKKSKFITIVEPISDKNEVQSLFKKYKEQYYDATHICFAYVIGRE
CCCCEEEEECCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
FNYMKAYDDGEPNGTAGIPILNIIKIKSLTNVIIFVVRYFGGIKLGTGGLIRAYSQCAKE
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHH
IIDNCEIIILQKYFYYKVVYKLKNTKFAKQILTSISYEKLIESYEDDRVILKIRINTKIN
HHCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCEEEEEEEECCEEE
IFMSKIEFIFIKHDY
EEEEEEEEEEEEECC
>Mature Secondary Structure 
SFKTIAYTQKNIKIIKKSKFITIVEPISDKNEVQSLFKKYKEQYYDATHICFAYVIGRE
CCCEEEEECCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
FNYMKAYDDGEPNGTAGIPILNIIKIKSLTNVIIFVVRYFGGIKLGTGGLIRAYSQCAKE
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHH
IIDNCEIIILQKYFYYKVVYKLKNTKFAKQILTSISYEKLIESYEDDRVILKIRINTKIN
HHCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCEEEEEEEECCEEE
IFMSKIEFIFIKHDY
EEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3141378; 8313894 [H]