| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is engB
Identifier: 13357826
GI number: 13357826
Start: 301046
End: 301672
Strand: Direct
Name: engB
Synonym: UU266
Alternate gene names: 13357826
Gene position: 301046-301672 (Clockwise)
Preceding gene: 13357825
Following gene: 13357827
Centisome position: 40.05
GC content: 26.79
Gene sequence:
>627_bases ATGGCAAAATTTATTAAATCTGCACACTATTTTGACCAATATCCAATTGATAAGCAGTTTGAAATATGTGTAATTGGTAG ATCAAATGTCGGTAAGTCAAGTTTAATTAATGCATTAGCAAATAAAAAAATTGCAAGGACTTCAAATACGCCTGGAAGAA CACAGTTAGTAAATTTTTTTGATTTCAATAATTTTAGATTGGTTGATTTACCGGGATATGGGTTTGCAAAAGTTAGTAAA GAAAAACAAACGGATTTAGCAGCCATTATTGATCAATATTTAGGGTATCGCCAAAACTTGTGTGCTGTTTTTCAAATTTG CGATATTAACGTATTAACAAATGATGATGTAGAAATGAGTCGATATTTTGAGAATCAAAAATACGCTCATTTTGTTGTTT TAAATAAATTAGATAAAGTTAATAAATCATATTTTAATAATAACAAGCATAAAATAGCTAAATTTTTAAATATTAGCACC GATCGTTTATTATGTGTTTCTGCACAAAATAATATAAATATTATCACATTATTTGCGTTAATGAAAAAAGTTGTAATCCA AGCAAAACAAGAAAAAATACTTTCAAAAAAAGAGGAGAAGATGAGTAGTGAAGAAGAAATTAAGTAA
Upstream 100 bases:
>100_bases AAGGATACAATTCGTATGATTTATCAACAAGTAGGACGTAAGCCAAGTGAGTCACAAATTAATGAGATTTATAATCGGGC AGTAAAACAAAAATAAATAT
Downstream 100 bases:
>100_bases GAAGTATTCATTCAAAGAGGTTGAAGCTAATAAATTATTGTTTTGACAAGAAAATAATTTATTTAAAGCTCAAATAAATA GTACAAAAAAACCTTTCACA
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAKFIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKKIARTSNTPGRTQLVNFFDFNNFRLVDLPGYGFAKVSK EKQTDLAAIIDQYLGYRQNLCAVFQICDINVLTNDDVEMSRYFENQKYAHFVVLNKLDKVNKSYFNNNKHKIAKFLNIST DRLLCVSAQNNINIITLFALMKKVVIQAKQEKILSKKEEKMSSEEEIK
Sequences:
>Translated_208_residues MAKFIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKKIARTSNTPGRTQLVNFFDFNNFRLVDLPGYGFAKVSK EKQTDLAAIIDQYLGYRQNLCAVFQICDINVLTNDDVEMSRYFENQKYAHFVVLNKLDKVNKSYFNNNKHKIAKFLNIST DRLLCVSAQNNINIITLFALMKKVVIQAKQEKILSKKEEKMSSEEEIK >Mature_207_residues AKFIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKKIARTSNTPGRTQLVNFFDFNNFRLVDLPGYGFAKVSKE KQTDLAAIIDQYLGYRQNLCAVFQICDINVLTNDDVEMSRYFENQKYAHFVVLNKLDKVNKSYFNNNKHKIAKFLNISTD RLLCVSAQNNINIITLFALMKKVVIQAKQEKILSKKEEKMSSEEEIK
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=177, Percent_Identity=36.7231638418079, Blast_Score=92, Evalue=3e-19, Organism=Escherichia coli, GI145693205, Length=140, Percent_Identity=42.1428571428571, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_UREP2 (B1AIQ5)
Other databases:
- EMBL: CP000942 - RefSeq: YP_001752349.1 - ProteinModelPortal: B1AIQ5 - SMR: B1AIQ5 - GeneID: 6155461 - GenomeReviews: CP000942_GR - KEGG: upa:UPA3_0274 - HOGENOM: HBG447097 - OMA: QTLNFFN - ProtClustDB: PRK00454 - BioCyc: UPAR505682:UPA3_0274-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - InterPro: IPR005225 - TIGRFAMs: TIGR03598 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23968; Mature: 23837
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKKIARTSNTPGRTQLVNFF CCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHEEEEEE DFNNFRLVDLPGYGFAKVSKEKQTDLAAIIDQYLGYRQNLCAVFQICDINVLTNDDVEMS ECCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEECCCHHHH RYFENQKYAHFVVLNKLDKVNKSYFNNNKHKIAKFLNISTDRLLCVSAQNNINIITLFAL HHHCCCCEEEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEHHHH MKKVVIQAKQEKILSKKEEKMSSEEEIK HHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure AKFIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKKIARTSNTPGRTQLVNFF CHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHEEEEEE DFNNFRLVDLPGYGFAKVSKEKQTDLAAIIDQYLGYRQNLCAVFQICDINVLTNDDVEMS ECCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEECCCHHHH RYFENQKYAHFVVLNKLDKVNKSYFNNNKHKIAKFLNISTDRLLCVSAQNNINIITLFAL HHHCCCCEEEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEHHHH MKKVVIQAKQEKILSKKEEKMSSEEEIK HHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA