| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700830
Identifier: 126700830
GI number: 126700830
Start: 3756839
End: 3757489
Strand: Direct
Name: 126700830
Synonym: CD3211
Alternate gene names: NA
Gene position: 3756839-3757489 (Clockwise)
Preceding gene: 126700829
Following gene: 126700843
Centisome position: 87.57
GC content: 28.26
Gene sequence:
>651_bases ATGAATATAGTAATGATAAATGGTAGTCCAAAAGTAAATAAAAATAATTCACAGTATTTTTTATCTGAATTAAAACAACT TATTCAAAATGATAATAAAGTTTTTACATTTAAAGTAGATAACACATCTAAGTATCCTGACGCTCTTAATGCCATACTTA ATTGTGATAGATTAATAATCGCATCTCCTCTTTATGTAGATGGTATTCCGTCTCATTTACTTCATTTTTTAGAGAAATGT GAAAAATTTTTAAAAACACAAAATAAAAAACCTATTCCAGTGTATGCAATAGTTAACTGTGGATTCAATGAAGGTGAACA TAATCATTTGGCAATTCAAATAATAGAGCATTGGTGTAAAAAAATCAACTTTACATGGGTTCAAGGTATTGGAATTGGAG CTGGGGAGATGTTTGGTTCACTAGAATCCGTACCTTTGGGTAAAGGACCTAAAAAAGATTTAGGAATTGCATTAAAAGAA CTTTCAAAAAATATACTTAGTGATAATATACATATAGATGATTCCAACAAAAGTACTATTTTTATTTCACCTAACTTCCC TAGATTCCTATATAAACTTATGGGGAATCATCAATGGAATACTCAGGCTAAATCAAATGGATTGACTAAAAGTGATATAC TAAAGAAATAA
Upstream 100 bases:
>100_bases CTGCTACGAAATTAGTAAATGGAAATGCTATAAATTTCAATATAAAAGAACACTCTGTTTGTTTCTATGAAAATATACAA GATATAAGAGGTGAATCCAT
Downstream 100 bases:
>100_bases AATTTTACTTCAACAAATACTAAAAACCGTCAAGCACGAATAAACTATTCATCTTGACGGTTTTTTATGTTATTTATATT CACTAGACATGGGATAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Multimeric Flavodoxin WrbA Family Protein Diverged Or
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MNIVMINGSPKVNKNNSQYFLSELKQLIQNDNKVFTFKVDNTSKYPDALNAILNCDRLIIASPLYVDGIPSHLLHFLEKC EKFLKTQNKKPIPVYAIVNCGFNEGEHNHLAIQIIEHWCKKINFTWVQGIGIGAGEMFGSLESVPLGKGPKKDLGIALKE LSKNILSDNIHIDDSNKSTIFISPNFPRFLYKLMGNHQWNTQAKSNGLTKSDILKK
Sequences:
>Translated_216_residues MNIVMINGSPKVNKNNSQYFLSELKQLIQNDNKVFTFKVDNTSKYPDALNAILNCDRLIIASPLYVDGIPSHLLHFLEKC EKFLKTQNKKPIPVYAIVNCGFNEGEHNHLAIQIIEHWCKKINFTWVQGIGIGAGEMFGSLESVPLGKGPKKDLGIALKE LSKNILSDNIHIDDSNKSTIFISPNFPRFLYKLMGNHQWNTQAKSNGLTKSDILKK >Mature_216_residues MNIVMINGSPKVNKNNSQYFLSELKQLIQNDNKVFTFKVDNTSKYPDALNAILNCDRLIIASPLYVDGIPSHLLHFLEKC EKFLKTQNKKPIPVYAIVNCGFNEGEHNHLAIQIIEHWCKKINFTWVQGIGIGAGEMFGSLESVPLGKGPKKDLGIALKE LSKNILSDNIHIDDSNKSTIFISPNFPRFLYKLMGNHQWNTQAKSNGLTKSDILKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24370; Mature: 24370
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVMINGSPKVNKNNSQYFLSELKQLIQNDNKVFTFKVDNTSKYPDALNAILNCDRLII CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCHHEE ASPLYVDGIPSHLLHFLEKCEKFLKTQNKKPIPVYAIVNCGFNEGEHNHLAIQIIEHWCK ECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH KINFTWVQGIGIGAGEMFGSLESVPLGKGPKKDLGIALKELSKNILSDNIHIDDSNKSTI HCCCEEEEEECCCHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEE FISPNFPRFLYKLMGNHQWNTQAKSNGLTKSDILKK EECCCCHHHHHHHHCCCCCCCCHHCCCCCHHHHCCC >Mature Secondary Structure MNIVMINGSPKVNKNNSQYFLSELKQLIQNDNKVFTFKVDNTSKYPDALNAILNCDRLII CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCHHEE ASPLYVDGIPSHLLHFLEKCEKFLKTQNKKPIPVYAIVNCGFNEGEHNHLAIQIIEHWCK ECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH KINFTWVQGIGIGAGEMFGSLESVPLGKGPKKDLGIALKELSKNILSDNIHIDDSNKSTI HCCCEEEEEECCCHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEE FISPNFPRFLYKLMGNHQWNTQAKSNGLTKSDILKK EECCCCHHHHHHHHCCCCCCCCHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA