| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126700829
Identifier: 126700829
GI number: 126700829
Start: 3756330
End: 3756842
Strand: Direct
Name: 126700829
Synonym: CD3210
Alternate gene names: NA
Gene position: 3756330-3756842 (Clockwise)
Preceding gene: 126700828
Following gene: 126700830
Centisome position: 87.55
GC content: 28.27
Gene sequence:
>513_bases ATGGACTTTATGAGGCTTTTAATACATGATTTAACTGACAAAGAATTAGAAAAGTTATTACCCAAACTTGATGACAATAT AAAAATACTTCCAAACACAAAAGAAATCCACAAATGTATTGGTTGTTTTGGTTGCTGGATTAAAACTCCTTCTGAATGTG TTGTAAAAGATTATTACAGCAACATGGGTAAACTTATAAATGAATCTGATGGAATTATTATAATAAGCAGATGCTGTTAC GGAGGGTTTAGCCCTTTTGTCAAAAACGTACTTGATAAAAGCATTAATTATATTCTTCCATACTTTGTAATAAAAGATAA TATGATGCGTCATAAAAGCAGATATGATAAACAGATAAATTTAAAAGCTATATTCTATGGAGATTGTATTACAGAAGCTG AAAAAGAAACTGCTACGAAATTAGTAAATGGAAATGCTATAAATTTCAATATAAAAGAACACTCTGTTTGTTTCTATGAA AATATACAAGATATAAGAGGTGAATCCATATGA
Upstream 100 bases:
>100_bases TGGAGTTGACTATTATAATTTTGTTATTAATTGGTGTAAAGATTTACTGAAAAATCTATAAGATATAATTTTTAGAAGTA AACATACATAATAAAAGGAG
Downstream 100 bases:
>100_bases ATATAGTAATGATAAATGGTAGTCCAAAAGTAAATAAAAATAATTCACAGTATTTTTTATCTGAATTAAAACAACTTATT CAAAATGATAATAAAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NADPH-Dependent FMN Reductase; Multimeric Flavodoxin WrbA; Multimeric Flavodoxin WrbA-Like Protein
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MDFMRLLIHDLTDKELEKLLPKLDDNIKILPNTKEIHKCIGCFGCWIKTPSECVVKDYYSNMGKLINESDGIIIISRCCY GGFSPFVKNVLDKSINYILPYFVIKDNMMRHKSRYDKQINLKAIFYGDCITEAEKETATKLVNGNAINFNIKEHSVCFYE NIQDIRGESI
Sequences:
>Translated_170_residues MDFMRLLIHDLTDKELEKLLPKLDDNIKILPNTKEIHKCIGCFGCWIKTPSECVVKDYYSNMGKLINESDGIIIISRCCY GGFSPFVKNVLDKSINYILPYFVIKDNMMRHKSRYDKQINLKAIFYGDCITEAEKETATKLVNGNAINFNIKEHSVCFYE NIQDIRGESI >Mature_170_residues MDFMRLLIHDLTDKELEKLLPKLDDNIKILPNTKEIHKCIGCFGCWIKTPSECVVKDYYSNMGKLINESDGIIIISRCCY GGFSPFVKNVLDKSINYILPYFVIKDNMMRHKSRYDKQINLKAIFYGDCITEAEKETATKLVNGNAINFNIKEHSVCFYE NIQDIRGESI
Specific function: Unknown
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19674; Mature: 19674
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFMRLLIHDLTDKELEKLLPKLDDNIKILPNTKEIHKCIGCFGCWIKTPSECVVKDYYS CHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH NMGKLINESDGIIIISRCCYGGFSPFVKNVLDKSINYILPYFVIKDNMMRHKSRYDKQIN HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LKAIFYGDCITEAEKETATKLVNGNAINFNIKEHSVCFYENIQDIRGESI EEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MDFMRLLIHDLTDKELEKLLPKLDDNIKILPNTKEIHKCIGCFGCWIKTPSECVVKDYYS CHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH NMGKLINESDGIIIISRCCYGGFSPFVKNVLDKSINYILPYFVIKDNMMRHKSRYDKQIN HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LKAIFYGDCITEAEKETATKLVNGNAINFNIKEHSVCFYENIQDIRGESI EEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA