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The map label for this gene is padR [H]

Identifier: 126700828

GI number: 126700828

Start: 3755757

End: 3756290

Strand: Direct

Name: padR [H]

Synonym: CD3209

Alternate gene names: 126700828

Gene position: 3755757-3756290 (Clockwise)

Preceding gene: 126700825

Following gene: 126700829

Centisome position: 87.54

GC content: 26.03

Gene sequence:

>534_bases
TTGATACCAGGAGGTAATATGTTAGAATACATTATTTTAGGATTTTTAATGGAAAAAGAATTAAGTGGATACGACTTAAA
ACAAATAATGTCAGAAAGTACCTCGTACTTTTTTGACGCCAGCTTTGGAAGTATCTATCCTGCACTTAAAAGATTAGAAA
CAAAAGGATATATACACTATCACGAAGTTATAGATGGTAGCAAATTAAAAAAATTATATTCCATAACTAATACTGGTAAA
GAAGTATTTCTTGAATGGTTAAAGAAACCTATAAATTTTTCTAAAACAAAGCAAGACCACCTTGTTAATATATTCTTTTA
CAAGTATCTACCCAAAGAAATAATTGAAACAAACTTAAAAATGTTAATAACTGAAGTAGAATTACTTCTAAATAAATTAA
GTAAACAAAAAAATGATGCAGAAGAAAATCATTGCGTTGACCAATATACATATATGTATGCAACAATGATTTATGGAGTT
GACTATTATAATTTTGTTATTAATTGGTGTAAAGATTTACTGAAAAATCTATAA

Upstream 100 bases:

>100_bases
TATCAATAACTCCTAATTCTTTTTAGCTTATCTTAAAAAGCATCTTGACGTAAGATTTATTATCTGTAATAATAAATATA
TCGAATCGATATATATCTAA

Downstream 100 bases:

>100_bases
GATATAATTTTTAGAAGTAAACATACATAATAAAAGGAGATGGACTTTATGAGGCTTTTAATACATGATTTAACTGACAA
AGAATTAGAAAAGTTATTAC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MIPGGNMLEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHYHEVIDGSKLKKLYSITNTGK
EVFLEWLKKPINFSKTKQDHLVNIFFYKYLPKEIIETNLKMLITEVELLLNKLSKQKNDAEENHCVDQYTYMYATMIYGV
DYYNFVINWCKDLLKNL

Sequences:

>Translated_177_residues
MIPGGNMLEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHYHEVIDGSKLKKLYSITNTGK
EVFLEWLKKPINFSKTKQDHLVNIFFYKYLPKEIIETNLKMLITEVELLLNKLSKQKNDAEENHCVDQYTYMYATMIYGV
DYYNFVINWCKDLLKNL
>Mature_177_residues
MIPGGNMLEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHYHEVIDGSKLKKLYSITNTGK
EVFLEWLKKPINFSKTKQDHLVNIFFYKYLPKEIIETNLKMLITEVELLLNKLSKQKNDAEENHCVDQYTYMYATMIYGV
DYYNFVINWCKDLLKNL

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 20900; Mature: 20900

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGGNMLEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHY
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCHH
HEVIDGSKLKKLYSITNTGKEVFLEWLKKPINFSKTKQDHLVNIFFYKYLPKEIIETNLK
HHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MLITEVELLLNKLSKQKNDAEENHCVDQYTYMYATMIYGVDYYNFVINWCKDLLKNL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPGGNMLEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHY
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCHH
HEVIDGSKLKKLYSITNTGKEVFLEWLKKPINFSKTKQDHLVNIFFYKYLPKEIIETNLK
HHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MLITEVELLLNKLSKQKNDAEENHCVDQYTYMYATMIYGVDYYNFVINWCKDLLKNL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]