The gene/protein map for NC_008536 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700637

Identifier: 126700637

GI number: 126700637

Start: 3505322

End: 3506176

Strand: Direct

Name: 126700637

Synonym: CD3017

Alternate gene names: NA

Gene position: 3505322-3506176 (Clockwise)

Preceding gene: 126700627

Following gene: 126700650

Centisome position: 81.7

GC content: 27.84

Gene sequence:

>855_bases
ATGCTGACAATAATTATTGCTTTACTTCCTGTAATGGGATGGGGATTGATGCCCATAGTTGCAAATCTAAAGAAAAGTTC
TCCTCATGAACAGCTTTTAGGTACATCCATAAGTGCGTTTATATTTTCCACTATAATAACTCTGGTTATACATCCTGAAA
TTACATTTTTTTCATTTTGTATAAGTATGATTTCTGGCATATTCTGGAGTTTGGGACAATTAATGCAGTTTAAAGCAATT
CAAATTGCTAGTGTATCTAAAGTAATGCCAATTTCAAATGGTTCACAATTAACTTTTACGACATTATTAGCTGTAATCTT
GTTTAATGAATGGACCAGTTCTAAAATGTTACTGATTGGTTCTTTATCAATATTATGTATAATACTTGGTATACTTCTCA
CAAATTATCAAACTAAAAAATCTACAGATAAAAATATGTTAAAATGTGTTGGAGTTGTATTATTATCATCTCTATTTTTA
TCATTATATGTTGTAACTAATCAAATATTTTTAATTGAAGGATATAGAATTATATTACCTCAATCTGTTGGTATGTTGAT
AACTTCATCTATTATTGTCAAGTATTTTTCTAAAGAGATTGTATATAGGGAAAATGTTTTATTCAATTTAATTACTGGTA
TATTGTGGTCAATAGCAAATTTAGGTATGTTCATAACGACTAATACATTGGGAGTTACAATAAGTTTTTCTATCTCTCAG
AGTTGTGTGATAGTAGCCACTTTAGGAGGGATTATATTTTTTAAAGAAAAGAAGAACAAAAAAGAATGGCTTGCTATTTT
TATTGGTATAATACTAATCATGTCTGGTGTCTTTATGTTGAGTATTATAAAATAG

Upstream 100 bases:

>100_bases
TATTTCCTGATTAAATACGGTAATTTTTATGTATTGAACACTTTAATTTTAGATGATAAATTAAAAGCTGTCTAAATTTA
ATATGAAAGGAAATAGTTTA

Downstream 100 bases:

>100_bases
GTATTTATTTACACTAATCATATATAGTTTTGTACATATAAATTAACTGTTTCTATTTATTTAAATAAATTTGCTTATAT
ACTTAAAATAATAGCATATG

Product: sugar uptake protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLTIIIALLPVMGWGLMPIVANLKKSSPHEQLLGTSISAFIFSTIITLVIHPEITFFSFCISMISGIFWSLGQLMQFKAI
QIASVSKVMPISNGSQLTFTTLLAVILFNEWTSSKMLLIGSLSILCIILGILLTNYQTKKSTDKNMLKCVGVVLLSSLFL
SLYVVTNQIFLIEGYRIILPQSVGMLITSSIIVKYFSKEIVYRENVLFNLITGILWSIANLGMFITTNTLGVTISFSISQ
SCVIVATLGGIIFFKEKKNKKEWLAIFIGIILIMSGVFMLSIIK

Sequences:

>Translated_284_residues
MLTIIIALLPVMGWGLMPIVANLKKSSPHEQLLGTSISAFIFSTIITLVIHPEITFFSFCISMISGIFWSLGQLMQFKAI
QIASVSKVMPISNGSQLTFTTLLAVILFNEWTSSKMLLIGSLSILCIILGILLTNYQTKKSTDKNMLKCVGVVLLSSLFL
SLYVVTNQIFLIEGYRIILPQSVGMLITSSIIVKYFSKEIVYRENVLFNLITGILWSIANLGMFITTNTLGVTISFSISQ
SCVIVATLGGIIFFKEKKNKKEWLAIFIGIILIMSGVFMLSIIK
>Mature_284_residues
MLTIIIALLPVMGWGLMPIVANLKKSSPHEQLLGTSISAFIFSTIITLVIHPEITFFSFCISMISGIFWSLGQLMQFKAI
QIASVSKVMPISNGSQLTFTTLLAVILFNEWTSSKMLLIGSLSILCIILGILLTNYQTKKSTDKNMLKCVGVVLLSSLFL
SLYVVTNQIFLIEGYRIILPQSVGMLITSSIIVKYFSKEIVYRENVLFNLITGILWSIANLGMFITTNTLGVTISFSISQ
SCVIVATLGGIIFFKEKKNKKEWLAIFIGIILIMSGVFMLSIIK

Specific function: Unknown

COG id: COG4975

COG function: function code G; Putative glucose uptake permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GRP transporter (TC 2.A.7.5) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010651 [H]

Pfam domain/function: PF06800 Sugar_transport [H]

EC number: NA

Molecular weight: Translated: 31431; Mature: 31431

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIIIALLPVMGWGLMPIVANLKKSSPHEQLLGTSISAFIFSTIITLVIHPEITFFSFC
CHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ISMISGIFWSLGQLMQFKAIQIASVSKVMPISNGSQLTFTTLLAVILFNEWTSSKMLLIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHH
SLSILCIILGILLTNYQTKKSTDKNMLKCVGVVLLSSLFLSLYVVTNQIFLIEGYRIILP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECEEEECC
QSVGMLITSSIIVKYFSKEIVYRENVLFNLITGILWSIANLGMFITTNTLGVTISFSISQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECEEEEEEEEECCC
SCVIVATLGGIIFFKEKKNKKEWLAIFIGIILIMSGVFMLSIIK
CEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTIIIALLPVMGWGLMPIVANLKKSSPHEQLLGTSISAFIFSTIITLVIHPEITFFSFC
CHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ISMISGIFWSLGQLMQFKAIQIASVSKVMPISNGSQLTFTTLLAVILFNEWTSSKMLLIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHH
SLSILCIILGILLTNYQTKKSTDKNMLKCVGVVLLSSLFLSLYVVTNQIFLIEGYRIILP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECEEEECC
QSVGMLITSSIIVKYFSKEIVYRENVLFNLITGILWSIANLGMFITTNTLGVTISFSISQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECEEEEEEEEECCC
SCVIVATLGGIIFFKEKKNKKEWLAIFIGIILIMSGVFMLSIIK
CEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]