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The map label for this gene is 126699820

Identifier: 126699820

GI number: 126699820

Start: 2552625

End: 2553278

Strand: Direct

Name: 126699820

Synonym: CD2203

Alternate gene names: NA

Gene position: 2552625-2553278 (Clockwise)

Preceding gene: 126699819

Following gene: 126699831

Centisome position: 59.5

GC content: 28.9

Gene sequence:

>654_bases
ATGTCAAAATCAGAAAAGGGCAAAGAAACAAAAGCTAGTATTATAAGTGCTGCTAGAGAATTATTTTTTGAGCAAGGTTA
TCATAAGACAACAACTAGGCAAATTGCAGAAAGAGCTAATATAAATTTAGGTCTAATAAGCTATTACTTCTCAAGTAAAA
GCGAAATAGGAGCTATAATATATGAAGATATAAGAAATGAAATGCAGTCTTTAATCTATAACTACCATGAAGAAGGTACT
ATGATGATGTTCTTTCTTGCTATGAATGCTGACCTTTGTTTCCTTCTAAAAAACGAAGCATATAGAAATTTTTATTTGGA
TATAGCTTATGAAGAAGCTATTTTAAGCTATCAAAGAAGTGTAACCGAAATGGTCATGAAAAGATATGTTAATGATAAAG
AATCTATAGAACATGATGAATTAATACTTTCTTGTATTGGTATACTTGCTATGAAACCTGAAATAATTAGAGTTTATACT
TCACACAAGTACGATATATCTTCTCAAGCTGTAATAAAGCATTTTACAAAACAGTTTCTTATTAATCTTGGTCATAGTAC
GGATTTATGCGAAGAGATTTTAGAGGAATTGAGTAAATACTATATAGATATAGTTGACAATTTTACTCCAATAATAACTC
GTGTAAGAACTTAA

Upstream 100 bases:

>100_bases
TTGACAGAATTTTGGTTCCTATAATAGGTGGTTCTATTACAATATTTATAGTTAGCAAATTTTCAAAAAAAGATTGAAAA
GAGAGGTATATACAGTAAAT

Downstream 100 bases:

>100_bases
TAAAATTTTATTAAATTCTTAGAGACTGAAATTTTAAAATCATAATTTGATTTTAGGATTTCAGTCTTTATCATATTTAA
AGATATTTTATAGTATACCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSKSEKGKETKASIISAARELFFEQGYHKTTTRQIAERANINLGLISYYFSSKSEIGAIIYEDIRNEMQSLIYNYHEEGT
MMMFFLAMNADLCFLLKNEAYRNFYLDIAYEEAILSYQRSVTEMVMKRYVNDKESIEHDELILSCIGILAMKPEIIRVYT
SHKYDISSQAVIKHFTKQFLINLGHSTDLCEEILEELSKYYIDIVDNFTPIITRVRT

Sequences:

>Translated_217_residues
MSKSEKGKETKASIISAARELFFEQGYHKTTTRQIAERANINLGLISYYFSSKSEIGAIIYEDIRNEMQSLIYNYHEEGT
MMMFFLAMNADLCFLLKNEAYRNFYLDIAYEEAILSYQRSVTEMVMKRYVNDKESIEHDELILSCIGILAMKPEIIRVYT
SHKYDISSQAVIKHFTKQFLINLGHSTDLCEEILEELSKYYIDIVDNFTPIITRVRT
>Mature_216_residues
SKSEKGKETKASIISAARELFFEQGYHKTTTRQIAERANINLGLISYYFSSKSEIGAIIYEDIRNEMQSLIYNYHEEGTM
MMFFLAMNADLCFLLKNEAYRNFYLDIAYEEAILSYQRSVTEMVMKRYVNDKESIEHDELILSCIGILAMKPEIIRVYTS
HKYDISSQAVIKHFTKQFLINLGHSTDLCEEILEELSKYYIDIVDNFTPIITRVRT

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25364; Mature: 25233

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSEKGKETKASIISAARELFFEQGYHKTTTRQIAERANINLGLISYYFSSKSEIGAII
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
YEDIRNEMQSLIYNYHEEGTMMMFFLAMNADLCFLLKNEAYRNFYLDIAYEEAILSYQRS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
VTEMVMKRYVNDKESIEHDELILSCIGILAMKPEIIRVYTSHKYDISSQAVIKHFTKQFL
HHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHHH
INLGHSTDLCEEILEELSKYYIDIVDNFTPIITRVRT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKSEKGKETKASIISAARELFFEQGYHKTTTRQIAERANINLGLISYYFSSKSEIGAII
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
YEDIRNEMQSLIYNYHEEGTMMMFFLAMNADLCFLLKNEAYRNFYLDIAYEEAILSYQRS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
VTEMVMKRYVNDKESIEHDELILSCIGILAMKPEIIRVYTSHKYDISSQAVIKHFTKQFL
HHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHHH
INLGHSTDLCEEILEELSKYYIDIVDNFTPIITRVRT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA