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The map label for this gene is ydcN [C]

Identifier: 126699831

GI number: 126699831

Start: 2566735

End: 2567073

Strand: Direct

Name: ydcN [C]

Synonym: CD2214

Alternate gene names: 126699831

Gene position: 2566735-2567073 (Clockwise)

Preceding gene: 126699820

Following gene: 126699832

Centisome position: 59.83

GC content: 28.02

Gene sequence:

>339_bases
TTGGCAAATATAGGAAAAATAATAGGAGATAGAATAAAAGTCTATAGAACAAAATTGGGATATAGTCAAGAGTTTCTAGC
AGAAAAGGCAGGTTTACATCCAACATATATTGGTCAGATTGAAAGAGCTGAGACAAATACATCTATCAATATTATAATGA
AAATTGCTACTGCTTTAGACATACCACTTGAATTGTTATTTGCAAATATTATTACAACAGAAGGCGTTGATAACTCTGTA
CCTTTAGAATGTTATGAAATGATTAATAAATTAACTGAAAAAGAACAAATTGCAATGCTAGAGTTAATAAAGTGCATCAT
TAAATACAAAGAAATATAA

Upstream 100 bases:

>100_bases
TATAAAAACATATATAGTCTATATTTAGACTAAAAAAGTATAAATAGTCTATATAAAACAACTTAAACTATGAATATAAT
CTAAAGTGGAGGGATAATAA

Downstream 100 bases:

>100_bases
GTGAGGGAAATAGTAACAATAATGAATTATATAGGTAAAAGACTTAAAGAAGAACGGAAAAAAGCAAATTTAACTTCAAA
AGAATTTGCAAATATGGTTG

Product: regulatory protein

Products: NA

Alternate protein names: Regulatory Protein; XRE Family Transcriptional Regulator

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MANIGKIIGDRIKVYRTKLGYSQEFLAEKAGLHPTYIGQIERAETNTSINIIMKIATALDIPLELLFANIITTEGVDNSV
PLECYEMINKLTEKEQIAMLELIKCIIKYKEI

Sequences:

>Translated_112_residues
MANIGKIIGDRIKVYRTKLGYSQEFLAEKAGLHPTYIGQIERAETNTSINIIMKIATALDIPLELLFANIITTEGVDNSV
PLECYEMINKLTEKEQIAMLELIKCIIKYKEI
>Mature_111_residues
ANIGKIIGDRIKVYRTKLGYSQEFLAEKAGLHPTYIGQIERAETNTSINIIMKIATALDIPLELLFANIITTEGVDNSVP
LECYEMINKLTEKEQIAMLELIKCIIKYKEI

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12675; Mature: 12544

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANIGKIIGDRIKVYRTKLGYSQEFLAEKAGLHPTYIGQIERAETNTSINIIMKIATALD
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
IPLELLFANIITTEGVDNSVPLECYEMINKLTEKEQIAMLELIKCIIKYKEI
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANIGKIIGDRIKVYRTKLGYSQEFLAEKAGLHPTYIGQIERAETNTSINIIMKIATALD
CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
IPLELLFANIITTEGVDNSVPLECYEMINKLTEKEQIAMLELIKCIIKYKEI
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA