| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is putP2 [H]
Identifier: 126699819
GI number: 126699819
Start: 2551237
End: 2552601
Strand: Direct
Name: putP2 [H]
Synonym: CD2202
Alternate gene names: 126699819
Gene position: 2551237-2552601 (Clockwise)
Preceding gene: 126699811
Following gene: 126699820
Centisome position: 59.47
GC content: 30.99
Gene sequence:
>1365_bases ATGTTACTTTTAATTGTTACGTGTGCAATATACATATGGATTGGTTTTTATTTTTCAAAAAAAGTTAAAACAGCATCCGA TTTCCTAATCGCAGGTAGAAATCTGCCTTTGCCTATACTAGCTGCAACCATTGCTGCTACATCTTTTGGAGGAGGGTGCT TAGTTGGTGGAGTTCAATGGGGAGCTGAAAGAGGACTTTGGGTTGGAATGTATTCTACTATAGGTGCAGCTTTAGCTTGC TTTATAAATGCATTTTTCGCAGGAAAATTAAGAAGCTTATCTTGTGATATAACACCTGCTGATTATATTGAAACTAGATA TGGTCATAGTGTATTTTTAAGAGCTTATCAAAGTCTTGTAACACCAATATCTATACTAGCTATTATGGGTAGTCAATTAA TTTCTTTTGGTTCTGTATCTACTGCATTTGGTATTCCTTATGATATAGCTGTAATTATAGGAGTTATAGTTATAATTATA TATACTTATACATCAGGAATGTGGGGAGTTGCAGTATCAGCATTTATTCAACTTGCTATTTGTATAGTGTTTTTGCCAAT AGTAGCTTATATAAGCTTAAAATTAGTTGGCGACAACCCTTTACTTATGTTACAATCAATGGTAAAAGAACCATTCTTTC CAGGAAATAAATCGATTAGTGATTTTATGTATACAGTTTTACCATTAGTTTTAGGCTCAATATTTTCTTATGAAAGTTTT TTAAGATATCAATGTGCTGATAATGCTAAAAATGCAGTTAAAAGTAGTGTAATTGCAGGATTTATACTATTATTTCTTGC TTTCCCTATAGGAATAATTGGAGCTATTGGTGGTAGTTTATTTCCAAATATATCATCTGTTCAGGTTTTACCTCAAATGA TATCGACTACTTTGCCACCTTTAATATCTGTATTATTCTTAGCTGCTATATTGGCTGCCATAATGTCTACTGCCGATTCA TTAATGACCTCAATGAGTGCTATTATATCAAGAGATATTTATAACAAATTATTACATCCTAATATAGAATTTAATGATTT AAAAAATACTCTAAAGTATTCTCAAATTGCATCAGCTTTGACAGCTATAATAGGTGCAATCATAGCACTTAAATTTGATA GTTTATTAGAATTATTGTTTTGGCCAGCTCCATTATGTACAGGTGTAATATTTGCACCATTTGTAATTGGTCTTTGCTGG AAAGGTGCTACAAAAAAAGGAGCTATCTATGCTGTTATAGTAAGTGTTATATTGGCATTATTAAATATGATTGGTATTCT TACTGTATTTGACAGAATTTTGGTTCCTATAATAGGTGGTTCTATTACAATATTTATAGTTAGCAAATTTTCAAAAAAAG ATTGA
Upstream 100 bases:
>100_bases CTAAAACCAATAAAACAAATATCGTACTACTTTTATATAAAATATATTTTAAATATATTTTGTATATTTTATTAAAATAT TTTATAAAGGAGAAAAGACT
Downstream 100 bases:
>100_bases AAAGAGAGGTATATACAGTAAATATGTCAAAATCAGAAAAGGGCAAAGAAACAAAAGCTAGTATTATAAGTGCTGCTAGA GAATTATTTTTTGAGCAAGG
Product: sodium/solute symporter
Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]
Alternate protein names: Proline permease 2 [H]
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MLLLIVTCAIYIWIGFYFSKKVKTASDFLIAGRNLPLPILAATIAATSFGGGCLVGGVQWGAERGLWVGMYSTIGAALAC FINAFFAGKLRSLSCDITPADYIETRYGHSVFLRAYQSLVTPISILAIMGSQLISFGSVSTAFGIPYDIAVIIGVIVIII YTYTSGMWGVAVSAFIQLAICIVFLPIVAYISLKLVGDNPLLMLQSMVKEPFFPGNKSISDFMYTVLPLVLGSIFSYESF LRYQCADNAKNAVKSSVIAGFILLFLAFPIGIIGAIGGSLFPNISSVQVLPQMISTTLPPLISVLFLAAILAAIMSTADS LMTSMSAIISRDIYNKLLHPNIEFNDLKNTLKYSQIASALTAIIGAIIALKFDSLLELLFWPAPLCTGVIFAPFVIGLCW KGATKKGAIYAVIVSVILALLNMIGILTVFDRILVPIIGGSITIFIVSKFSKKD
Sequences:
>Translated_454_residues MLLLIVTCAIYIWIGFYFSKKVKTASDFLIAGRNLPLPILAATIAATSFGGGCLVGGVQWGAERGLWVGMYSTIGAALAC FINAFFAGKLRSLSCDITPADYIETRYGHSVFLRAYQSLVTPISILAIMGSQLISFGSVSTAFGIPYDIAVIIGVIVIII YTYTSGMWGVAVSAFIQLAICIVFLPIVAYISLKLVGDNPLLMLQSMVKEPFFPGNKSISDFMYTVLPLVLGSIFSYESF LRYQCADNAKNAVKSSVIAGFILLFLAFPIGIIGAIGGSLFPNISSVQVLPQMISTTLPPLISVLFLAAILAAIMSTADS LMTSMSAIISRDIYNKLLHPNIEFNDLKNTLKYSQIASALTAIIGAIIALKFDSLLELLFWPAPLCTGVIFAPFVIGLCW KGATKKGAIYAVIVSVILALLNMIGILTVFDRILVPIIGGSITIFIVSKFSKKD >Mature_454_residues MLLLIVTCAIYIWIGFYFSKKVKTASDFLIAGRNLPLPILAATIAATSFGGGCLVGGVQWGAERGLWVGMYSTIGAALAC FINAFFAGKLRSLSCDITPADYIETRYGHSVFLRAYQSLVTPISILAIMGSQLISFGSVSTAFGIPYDIAVIIGVIVIII YTYTSGMWGVAVSAFIQLAICIVFLPIVAYISLKLVGDNPLLMLQSMVKEPFFPGNKSISDFMYTVLPLVLGSIFSYESF LRYQCADNAKNAVKSSVIAGFILLFLAFPIGIIGAIGGSLFPNISSVQVLPQMISTTLPPLISVLFLAAILAAIMSTADS LMTSMSAIISRDIYNKLLHPNIEFNDLKNTLKYSQIASALTAIIGAIIALKFDSLLELLFWPAPLCTGVIFAPFVIGLCW KGATKKGAIYAVIVSVILALLNMIGILTVFDRILVPIIGGSITIFIVSKFSKKD
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI11141885, Length=420, Percent_Identity=24.047619047619, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI87082237, Length=440, Percent_Identity=26.1363636363636, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1787251, Length=373, Percent_Identity=24.1286863270777, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17539284, Length=417, Percent_Identity=24.220623501199, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 48771; Mature: 48771
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLIVTCAIYIWIGFYFSKKVKTASDFLIAGRNLPLPILAATIAATSFGGGCLVGGVQW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCEECCHHH GAERGLWVGMYSTIGAALACFINAFFAGKLRSLSCDITPADYIETRYGHSVFLRAYQSLV CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHH TPISILAIMGSQLISFGSVSTAFGIPYDIAVIIGVIVIIIYTYTSGMWGVAVSAFIQLAI HHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH CIVFLPIVAYISLKLVGDNPLLMLQSMVKEPFFPGNKSISDFMYTVLPLVLGSIFSYESF HHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRYQCADNAKNAVKSSVIAGFILLFLAFPIGIIGAIGGSLFPNISSVQVLPQMISTTLPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LISVLFLAAILAAIMSTADSLMTSMSAIISRDIYNKLLHPNIEFNDLKNTLKYSQIASAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TAIIGAIIALKFDSLLELLFWPAPLCTGVIFAPFVIGLCWKGATKKGAIYAVIVSVILAL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LNMIGILTVFDRILVPIIGGSITIFIVSKFSKKD HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC >Mature Secondary Structure MLLLIVTCAIYIWIGFYFSKKVKTASDFLIAGRNLPLPILAATIAATSFGGGCLVGGVQW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCEECCHHH GAERGLWVGMYSTIGAALACFINAFFAGKLRSLSCDITPADYIETRYGHSVFLRAYQSLV CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHH TPISILAIMGSQLISFGSVSTAFGIPYDIAVIIGVIVIIIYTYTSGMWGVAVSAFIQLAI HHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH CIVFLPIVAYISLKLVGDNPLLMLQSMVKEPFFPGNKSISDFMYTVLPLVLGSIFSYESF HHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRYQCADNAKNAVKSSVIAGFILLFLAFPIGIIGAIGGSLFPNISSVQVLPQMISTTLPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LISVLFLAAILAAIMSTADSLMTSMSAIISRDIYNKLLHPNIEFNDLKNTLKYSQIASAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TAIIGAIIALKFDSLLELLFWPAPLCTGVIFAPFVIGLCWKGATKKGAIYAVIVSVILAL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LNMIGILTVFDRILVPIIGGSITIFIVSKFSKKD HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA