Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699593

Identifier: 126699593

GI number: 126699593

Start: 2289019

End: 2289357

Strand: Direct

Name: 126699593

Synonym: CD1985

Alternate gene names: NA

Gene position: 2289019-2289357 (Clockwise)

Preceding gene: 126699592

Following gene: 126699599

Centisome position: 53.35

GC content: 27.43

Gene sequence:

>339_bases
ATGTTTGCTGTAGGATTTGTTGTTATAATTGCACTTGCCTTTTTCATTTTAAGTGTACTATTATTTAATGGAAAAGCCAG
TATGCTACTAGCAGGTTATAACTCTATGAGTAAGAAAGAAAAAGCACGATATGATAAAAAAAAATTATGTAGAAGTTCTA
GCATTGTTACTTTTATTGTCTCTATAATGCTATTTATTATGGCGTTTTTGGGATATAGAATAGAGAGTGGTCAAATGGAC
GAAAAAAAAATGGTTCCCTTTTCTATAATATTTATAATAGTCATACTTTCCAGTGTATTTTTTAATATCCTCTACTCTAA
CAAAAAATGTAAAAAATAA

Upstream 100 bases:

>100_bases
ATCTATTTAATAAAGTATGAAGTAAATGATTTTAATGTGCCTTTATGGTAAAATTACTAATAAGTAATAAAATTAATTAA
AATATATGGAGGTGCTTATA

Downstream 100 bases:

>100_bases
ATAGTTGTAAGTTGAGCAGTTAATTATAAAAGATTGACTGCTTTTTCATGTATATTGACTACTCTTATTAAATATTTTAA
CATTTAAAAATCTATGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MFAVGFVVIIALAFFILSVLLFNGKASMLLAGYNSMSKKEKARYDKKKLCRSSSIVTFIVSIMLFIMAFLGYRIESGQMD
EKKMVPFSIIFIIVILSSVFFNILYSNKKCKK

Sequences:

>Translated_112_residues
MFAVGFVVIIALAFFILSVLLFNGKASMLLAGYNSMSKKEKARYDKKKLCRSSSIVTFIVSIMLFIMAFLGYRIESGQMD
EKKMVPFSIIFIIVILSSVFFNILYSNKKCKK
>Mature_112_residues
MFAVGFVVIIALAFFILSVLLFNGKASMLLAGYNSMSKKEKARYDKKKLCRSSSIVTFIVSIMLFIMAFLGYRIESGQMD
EKKMVPFSIIFIIVILSSVFFNILYSNKKCKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12733; Mature: 12733

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAVGFVVIIALAFFILSVLLFNGKASMLLAGYNSMSKKEKARYDKKKLCRSSSIVTFIV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHH
SIMLFIMAFLGYRIESGQMDEKKMVPFSIIFIIVILSSVFFNILYSNKKCKK
HHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFAVGFVVIIALAFFILSVLLFNGKASMLLAGYNSMSKKEKARYDKKKLCRSSSIVTFIV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHH
SIMLFIMAFLGYRIESGQMDEKKMVPFSIIFIIVILSSVFFNILYSNKKCKK
HHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA