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The map label for this gene is nudL [H]

Identifier: 126699592

GI number: 126699592

Start: 2288110

End: 2288721

Strand: Direct

Name: nudL [H]

Synonym: CD1984

Alternate gene names: 126699592

Gene position: 2288110-2288721 (Clockwise)

Preceding gene: 126699571

Following gene: 126699593

Centisome position: 53.33

GC content: 26.47

Gene sequence:

>612_bases
ATGATAAACGATATTAAAAATAAATTCAAAAATTACAAACCATATATAAATGGATACAAGAATATGAAGAGAGCATCTGT
TTTAATTCCAATAGTAGAAATAAATAACACACACTATATATTATTTGAAGTTCGCTCAAAAAATTTGAAGCATCAACCTA
GCGAAATTTCTTTTCCAGGTGGTAAAATAGAATCAGGTGAGACTCCATATGAAGCTGTTATTAGAGAAACTTGTGAGGAA
CTTGGAACTTTTAGTGACAATATAGAAGTAATATCAAGTCTTGACCTCCTTATAACACCAGTAAAGTTTATCATACATCC
ATACTTAGGATATATAAAAAATATTAATAATTTAAATATAAACAAGGATGAAGTTGACCATACTTTTTTGGTTCCTATAA
AATATCTTTTAGAGAATCCTCCAAATACTTATAGTAATACTGTAAAAGTTTTTCCAGACGAAAATCTACCATATGGTTCA
ATTCCAAACCAAAAAGATTATAAATTTGAAAGTGGAAGTTATCCTATTCTGTTTTATAAATATAAAGATTATGTAATTTG
GGGAATGACAGCAAAAATACTAGAAAACTTTTTAAATTTTTTATCAGAATAA

Upstream 100 bases:

>100_bases
TAGATAGTTACTATATCTTATAATTAGATAAATCATAATTATATATTATTGTTAAAACTCAATTATATAATTTTTAATAA
TATTATTTTAGGAGGTAAAA

Downstream 100 bases:

>100_bases
CACTCATAATAAATCATCAAAACTTTTACATAAGAAATTTATAAAAGTTTCTAAATTTAACAATTCTAAAATATCAATAA
CTATATTTTGTAGCACTTTT

Product: NUDIX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MINDIKNKFKNYKPYINGYKNMKRASVLIPIVEINNTHYILFEVRSKNLKHQPSEISFPGGKIESGETPYEAVIRETCEE
LGTFSDNIEVISSLDLLITPVKFIIHPYLGYIKNINNLNINKDEVDHTFLVPIKYLLENPPNTYSNTVKVFPDENLPYGS
IPNQKDYKFESGSYPILFYKYKDYVIWGMTAKILENFLNFLSE

Sequences:

>Translated_203_residues
MINDIKNKFKNYKPYINGYKNMKRASVLIPIVEINNTHYILFEVRSKNLKHQPSEISFPGGKIESGETPYEAVIRETCEE
LGTFSDNIEVISSLDLLITPVKFIIHPYLGYIKNINNLNINKDEVDHTFLVPIKYLLENPPNTYSNTVKVFPDENLPYGS
IPNQKDYKFESGSYPILFYKYKDYVIWGMTAKILENFLNFLSE
>Mature_203_residues
MINDIKNKFKNYKPYINGYKNMKRASVLIPIVEINNTHYILFEVRSKNLKHQPSEISFPGGKIESGETPYEAVIRETCEE
LGTFSDNIEVISSLDLLITPVKFIIHPYLGYIKNINNLNINKDEVDHTFLVPIKYLLENPPNTYSNTVKVFPDENLPYGS
IPNQKDYKFESGSYPILFYKYKDYVIWGMTAKILENFLNFLSE

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=141, Percent_Identity=32.6241134751773, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17536993, Length=180, Percent_Identity=30, Blast_Score=88, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23604; Mature: 23604

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINDIKNKFKNYKPYINGYKNMKRASVLIPIVEINNTHYILFEVRSKNLKHQPSEISFPG
CCCHHHHHHHCCCCHHCCHHHHCCCEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCC
GKIESGETPYEAVIRETCEELGTFSDNIEVISSLDLLITPVKFIIHPYLGYIKNINNLNI
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NKDEVDHTFLVPIKYLLENPPNTYSNTVKVFPDENLPYGSIPNQKDYKFESGSYPILFYK
CHHHCCCEEHEEHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEE
YKDYVIWGMTAKILENFLNFLSE
ECCEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MINDIKNKFKNYKPYINGYKNMKRASVLIPIVEINNTHYILFEVRSKNLKHQPSEISFPG
CCCHHHHHHHCCCCHHCCHHHHCCCEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCC
GKIESGETPYEAVIRETCEELGTFSDNIEVISSLDLLITPVKFIIHPYLGYIKNINNLNI
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NKDEVDHTFLVPIKYLLENPPNTYSNTVKVFPDENLPYGSIPNQKDYKFESGSYPILFYK
CHHHCCCEEHEEHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEE
YKDYVIWGMTAKILENFLNFLSE
ECCEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA