Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699483

Identifier: 126699483

GI number: 126699483

Start: 2173276

End: 2173428

Strand: Direct

Name: 126699483

Synonym: CD1871A

Alternate gene names: NA

Gene position: 2173276-2173428 (Clockwise)

Preceding gene: 126699482

Following gene: 126699484

Centisome position: 50.66

GC content: 31.37

Gene sequence:

>153_bases
ATGGTTAATAAGTTTTTAAAAAGCCGTGCCTTGTCTTTATTAATTATCTTTATTAGTATGGCGATGATTTACTATGGTCA
TAGTAATGGAGAAACTAAAGTTGTCTTGGATAAGGCGATAAGAATTTGTATGGAGTGTATTGGAATTGGATAG

Upstream 100 bases:

>100_bases
TACTTATTCTGGGGCAAAGAGTGCAAAGGAATGGAAGCAGGTAATTGAAAAAGAATTGGAAAAAATAAAAAATAAATAAA
AGTAAAGCGGTGATTGGTAT

Downstream 100 bases:

>100_bases
AATTAAAAATATTATAAATGGTAGTACAAAAAAAGATAAATATAAAATAAGAGATCGTTTTAGGCATTTATTTCAATCCG
TTTGGTTTTTAATTACTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 50; Mature: 50

Protein sequence:

>50_residues
MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG

Sequences:

>Translated_50_residues
MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG
>Mature_50_residues
MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5593; Mature: 5593

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
12.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
12.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA